BPTF

Information BPTF

Description

This gene was identified by the reactivity of its encoded protein to a monoclonal antibody prepared against brain homogenates from patients with Alzheimer's disease. Analysis of the original protein (fetal Alz-50 reactive clone 1, or FAC1), identified as an 810 aa protein containing a DNA-binding domain and a zinc finger motif, suggested it might play a role in the regulation of transcription. High levels of FAC1 were detected in fetal brain and in patients with neurodegenerative diseases. The protein encoded by this gene is actually much larger than originally thought, and it also contains a C-terminal bromodomain characteristic of proteins that regulate transcription during proliferation. The encoded protein is highly similar to the largest subunit of the Drosophila NURF (nucleosome remodeling factor) complex. In Drosophila, the NURF complex, which catalyzes nucleosome sliding on DNA and interacts with sequence-specific transcription factors, is necessary for the chromatin remodeling required for transcription. Two alternative transcripts encoding different isoforms have been described completely. [provided by RefSeq, Jul 2008]

Full Name

bromodomain PHD finger transcription factor

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
221
Non-redundant peaks
221

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
2186
Official Gene Name
BPTF
JASPAR
Ensembl
ENSG00000171634
UniProt
Q12830
Genevisible
Q12830
RefSeq
NM_004459
Aliases
FAC1; FALZ; NEDDFL; NURF301
All peaks BPTF
Download BED file
Non redundant peaks BPTF
Download BED file
SEQUENCES BPTF
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for BPTF

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
BPTF T-47D-MTVL BPTF GEO Homo sapiens GSE64467 221
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks