CTCF

Information CTCF

Description

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays an important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping (By similarity). Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19. Plays a role in the recruitment of CENPE to the pericentromeric/centromeric regions of the chromosome during mitosis (By similarity). {ECO:0000250|UniProtKB:P49711, ECO:0000269|PubMed:11743158, ECO:0000269|PubMed:15669143, ECO:0000269|PubMed:16614224, ECO:0000269|PubMed:16951251, ECO:0000269|PubMed:17329968, ECO:0000269|PubMed:17952071, ECO:0000269|PubMed:18614575}.(Source UnitProtKB).

Full Name

CCCTC-binding factor

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
386
Biotypes
91
Peaks
16,386,074
Non-redundant peaks
781,945

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
13018
Official Gene Name
Ctcf
JASPAR
MGI
MGI:109447
Ensembl
ENSMUSG00000005698
UniProt
Q61164
Genevisible
Q61164
RefSeq
Aliases
AW108038
All peaks CTCF
Download BED file
Non redundant peaks CTCF
Download BED file
SEQUENCES CTCF
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for CTCF

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
CTCF spleen plasmablast GEO Mus musculus GSE44637 41,023
CTCF spleen GEO Mus musculus GSE43594 23,547
CTCF spleen stimulated GEO Mus musculus GSE43594 12,514
CTCF spleen biotag_mZF11 GEO Mus musculus GSE33819 73,084
CTCF fibroblast NIH3T3_M GEO Mus musculus GSE131356 4,716
CTCF fibroblast NIH3T3_I GEO Mus musculus GSE131356 58,723
CTCF fibroblast Xist-del GEO Mus musculus GSE67516 27,887
CTCF CH12-LX ENCODE Mus musculus ENCSR000DIU 28,452
CTCF CH12-LX ENCODE Mus musculus ENCSR000ERM 54,671
CTCF small-intestine ENCODE Mus musculus ENCSR000CED 41,671
CTCF Th1 Ifng-as1-KO GEO Mus musculus GSE132531 24,635
CTCF Th1 PolyA-KI GEO Mus musculus GSE132531 3,748
CTCF Th1 GEO Mus musculus GSE60482 79,040
CTCF MEL ENCODE Mus musculus ENCSR000CFH 52,529
CTCF NPC GEO Mus musculus GSE85185 47,272
CTCF NPC ES-derived_Smchd1-neg GEO Mus musculus GSE99991 64,420
CTCF NPC GEO Mus musculus GSE36203 50,612
CTCF G1E-ER4 late-G1 GEO Mus musculus GSE129997 44,761
CTCF G1E-ER4 prometa GEO Mus musculus GSE129997 18,662
CTCF G1E-ER4 Brd2-KO GEO Mus musculus GSE80527 35,208
CTCF G1E-ER4 17b-estradiol_10-nM_24-hour ENCODE Mus musculus ENCSR000DIR 34,377
CTCF CD4-pos IL-2 GEO Mus musculus GSE88857 43,524
CTCF CD4-pos GEO Mus musculus GSE88857 57,636
CTCF CD4-pos aKG GEO Mus musculus GSE88857 52,459
CTCF liver TAF4-hep GEO Mus musculus GSE57807 32,332
CTCF liver GEO Mus musculus GSE29218 35,939
CTCF liver ENCODE Mus musculus ENCSR041SMK 60,848
CTCF liver ENCODE Mus musculus ENCSR397RHW 51,349
CTCF liver TAM GEO Mus musculus GSE93431 33,765
CTCF liver NIPBL GEO Mus musculus GSE93431 9,846
CTCF liver GEO Mus musculus GSE102997 77,254
CTCF liver ENCODE Mus musculus ENCSR000CBU 37,693
CTCF nephron-progenitor GEO Mus musculus GSE90016 41,383
CTCF P19 GEO Mus musculus GSE103198 29,850
CTCF HPC-7 Ery_shStag2 GEO Mus musculus GSE129478 42,356
CTCF HPC-7 Luc GEO Mus musculus GSE129478 45,546
CTCF HPC-7 shRad21 GEO Mus musculus GSE129478 59,023
CTCF HPC-7 Myelo_Luc GEO Mus musculus GSE129478 25,701
CTCF HPC-7 serum-starved GEO Mus musculus GSE100835 37,329
CTCF MEF Rosa26 GEO Mus musculus GSE76303 54,011
CTCF MEF Wapl-pos GEO Mus musculus GSE41602 29,533
CTCF MEF GEO Mus musculus GSE76303 56,810
CTCF MEF Firre-transgene GEO Mus musculus GSE104427 9,667
CTCF MEF GEO Mus musculus GSE99195 62,134
CTCF MEF GEO Mus musculus GSE29218 37,149
CTCF MEF Wapl-neg GEO Mus musculus GSE41602 35,535
CTCF MEF GEO Mus musculus GSE22562 25,381
CTCF MEF GEO Mus musculus GSE104427 13,221
CTCF MEF p3 GEO Mus musculus GSE76478 66,457
CTCF MEF GEO Mus musculus GSE111820 77,282
CTCF MEF KO GEO Mus musculus GSE69798 55,181
CTCF MEF ENCODE Mus musculus ENCSR000CBW 42,447
CTCF MEF GEO Mus musculus GSE122019 28,095
CTCF MEF GEO Mus musculus GSE69798 64,317
CTCF MEF mut GEO Mus musculus GSE122019 35,891
CTCF AML12 shU GEO Mus musculus GSE95113 66,950
CTCF cortex GEO Mus musculus GSE29218 40,921
CTCF cortex M_CK-KO GEO Mus musculus GSE99363 35,611
CTCF cortex F_CK-KO GEO Mus musculus GSE99363 69,425
CTCF cortex F_WT GEO Mus musculus GSE99363 44,812
CTCF olfactory-bulb ENCODE Mus musculus ENCSR000CDX 48,058
CTCF lymphoma BORIS_V5 GEO Mus musculus GSE137216 15,213
CTCF lymphoma N4-mut_V5 GEO Mus musculus GSE137216 79,482
CTCF lymphoma mut_BORIS GEO Mus musculus GSE137216 64,786
CTCF lymphoma mut_BORIS_V5 GEO Mus musculus GSE137216 33,377
CTCF lymphoma N2-mut GEO Mus musculus GSE137216 65,792
CTCF lymphoma DMSO GEO Mus musculus GSE137216 48,516
CTCF lymphoma AZF-mut_V5 GEO Mus musculus GSE137216 56,303
CTCF lymphoma N1-mut GEO Mus musculus GSE137216 67,740
CTCF lymphoma mut_Nterm_11ZFs_V5 GEO Mus musculus GSE137216 35,606
CTCF lymphoma 11ZFs-Cterm_V5 GEO Mus musculus GSE137216 34,437
CTCF lymphoma chimera1_V5 GEO Mus musculus GSE137216 55,217
CTCF lymphoma N5-mut_V5 GEO Mus musculus GSE137216 71,335
CTCF thymocyte GEO Mus musculus GSE41739 27,994
CTCF thymocyte GEO Mus musculus GSE41740 49,080
CTCF spermatid GEO Mus musculus GSE70764 44,394
CTCF cortical-neuron GEO Mus musculus GSE96107 21,636
CTCF pre-B-cell p3 GEO Mus musculus GSE76478 79,176
CTCF pre-B-cell p20 GEO Mus musculus GSE76478 65,341
CTCF pre-B-cell GEO Mus musculus GSE109909 40,619
CTCF BMDC 1h GEO Mus musculus GSE36099 36,758
CTCF BMDC 30min GEO Mus musculus GSE36099 33,485
CTCF macrophage p20 GEO Mus musculus GSE76478 57,020
CTCF macrophage p3 GEO Mus musculus GSE76478 60,494
CTCF pre-pro-B-cell GEO Mus musculus GSE40173 26,577
CTCF embryonic-heart GEO Mus musculus GSE29218 11,967
CTCF Th17 GEO Mus musculus GSE40918 67,057
CTCF C2C12 ENCODE Mus musculus ENCSR000AIJ 23,334
CTCF EL4 GEO Mus musculus GSE66343 5,318
CTCF EL4 KO GEO Mus musculus GSE66343 16,913
CTCF kidney GEO Mus musculus GSE29218 52,523
CTCF kidney ENCODE Mus musculus ENCSR143WOK 70,263
CTCF preadipocyte D7 GEO Mus musculus GSE95533 77,434
CTCF preadipocyte D0 GEO Mus musculus GSE95533 78,858
CTCF cerebellum Ai32-fl-fl_Atoh1-CRE_opt GEO Mus musculus GSE127995 18,197
CTCF cerebellum Ai32-fl-fl_Atoh1-CRE GEO Mus musculus GSE127995 35,290
CTCF cerebellum GEO Mus musculus GSE29218 29,982
CTCF intestinal-villus-epithelial-cell WT GEO Mus musculus GSE98724 35,718
CTCF iPSC AmacFibr_F_N-fG140-02 GEO Mus musculus GSE109712 46,806
CTCF iPSC Cone_M_Y-257-03 GEO Mus musculus GSE109712 45,088
CTCF iPSC Mull_M_N-rCr33-05 GEO Mus musculus GSE109712 41,168
CTCF iPSC Bipo_I_N-rM0408 GEO Mus musculus GSE109712 55,637
CTCF iPSC Y-fMG02 GEO Mus musculus GSE87037 46,327
CTCF iPSC Y-fMG03 GEO Mus musculus GSE87037 36,684
CTCF iPSC Mull_M_Y-Cr143-01 GEO Mus musculus GSE109712 43,472
CTCF iPSC RodFibr_F_Y-FNR07 GEO Mus musculus GSE109712 32,887
CTCF iPSC MullFibr_F_N-FCR02 GEO Mus musculus GSE109712 46,354
CTCF iPSC MullFibr_F_N-FCR01 GEO Mus musculus GSE109712 44,989
CTCF iPSC Y-Eb5 GEO Mus musculus GSE87037 45,620
CTCF iPSC Mull_M_Y-rCr33-01 GEO Mus musculus GSE109712 43,521
CTCF iPSC Y-8601 GEO Mus musculus GSE87037 65,318
CTCF iPSC Mull_M_Y-rCr33-04 GEO Mus musculus GSE109712 46,500
CTCF iPSC Mull_I_Y-207-11 GEO Mus musculus GSE109712 55,951
CTCF iPSC Y-fG140-03 GEO Mus musculus GSE87037 43,075
CTCF iPSC Y-fG140-04 GEO Mus musculus GSE87037 65,376
CTCF iPSC Bipo_I_Y-rM0405 GEO Mus musculus GSE109712 49,667
CTCF iPSC Bipo_I_Y-rM0401 GEO Mus musculus GSE109712 40,036
CTCF iPSC Cone_I_N-rCh209-04 GEO Mus musculus GSE109712 54,933
CTCF iPSC Mull_M_N-rCr143-02 GEO Mus musculus GSE109712 28,272
CTCF iPSC Rod_I_Y-8602 GEO Mus musculus GSE109712 45,927
CTCF iPSC Mull_M_N-rCr263-4 GEO Mus musculus GSE109712 49,536
CTCF iPSC Mull_M_Y-263-08 GEO Mus musculus GSE109712 46,495
CTCF sperm GEO Mus musculus GSE79227 6,386
CTCF G1E ENCODE Mus musculus ENCSR000DIS 19,720
CTCF forelimb GEO Mus musculus GSE42237 37,950
CTCF thymus GEO Mus musculus GSE29218 64,353
CTCF thymus ENCODE Mus musculus ENCSR000CDZ 65,581
CTCF embryonic-brain GEO Mus musculus GSE29218 47,822
CTCF myeloid-progenitor GEO Mus musculus GSE93127 28,693
CTCF primary-B-cell resting GEO Mus musculus GSE99195 77,790
CTCF primary-B-cell activated GEO Mus musculus GSE99195 58,659
CTCF trophoblast-stem-cell G1 GEO Mus musculus GSE41371 2,352
CTCF trophoblast-stem-cell S GEO Mus musculus GSE41371 38,557
CTCF trophoblast-stem-cell M GEO Mus musculus GSE41371 9,613
CTCF trophoblast-stem-cell GEO Mus musculus GSE40667 56,217
CTCF WEHI-231 GEO Mus musculus GSE60917 29,319
CTCF erythroid D38 GEO Mus musculus GSE97869 49,698
CTCF erythroid D39 GEO Mus musculus GSE97869 56,020
CTCF spermatocyte RS GEO Mus musculus GSE132054 2,692
CTCF spermatocyte PD GEO Mus musculus GSE132054 24,086
CTCF brain CB GEO Mus musculus GSE35140 22,609
CTCF testis ENCODE Mus musculus ENCSR000CEF 22,073
CTCF testis GEO Mus musculus GSE29218 20,910
CTCF retina N-P14 GEO Mus musculus GSE87037 26,959
CTCF retina N-P10 GEO Mus musculus GSE87037 24,273
CTCF retina N-P0 GEO Mus musculus GSE87037 30,988
CTCF retina N-P3 GEO Mus musculus GSE87037 22,578
CTCF retina N-P7 GEO Mus musculus GSE87037 27,361
CTCF retina N-E17-5 GEO Mus musculus GSE87037 18,803
CTCF retina N-WTM11 GEO Mus musculus GSE87037 30,191
CTCF retina N-P21 GEO Mus musculus GSE87037 31,276
CTCF primary-T-cell GEO Mus musculus GSE99195 75,265
CTCF embryonic-limb-bud FL-E135 GEO Mus musculus GSE84793 26,420
CTCF embryonic-limb-bud HL-E115 GEO Mus musculus GSE84793 43,856
CTCF embryonic-limb-bud HL-E135 GEO Mus musculus GSE84793 24,682
CTCF embryonic-limb-bud FL-E105 GEO Mus musculus GSE84793 61,679
CTCF embryonic-limb-bud HL-E105 GEO Mus musculus GSE84793 58,643
CTCF mESC meth-adapt_NC GEO Mus musculus GSE129673 54,074
CTCF mESC washoff2days GEO Mus musculus GSE98671 67,458
CTCF mESC GEO Mus musculus GSE114599 42,292
CTCF mESC Snf2KO GEO Mus musculus GSE112132 7,782
CTCF mESC KO GEO Mus musculus GSE123101 51,009
CTCF mESC WT GEO Mus musculus GSE99530 40,917
CTCF mESC untreated GEO Mus musculus GSE98671 54,804
CTCF mESC addbackMut GEO Mus musculus GSE112132 27,026
CTCF mESC GEO Mus musculus GSE112132 38,934
CTCF mESC differentiated GEO Mus musculus GSE39502 10,174
CTCF mESC KO GEO Mus musculus GSE99530 38,380
CTCF mESC Brg1KO GEO Mus musculus GSE112132 49,151
CTCF mESC nextera-adapt GEO Mus musculus GSE129673 62,141
CTCF mESC Tet1-2-KO GEO Mus musculus GSE114599 23,515
CTCF mESC GEO Mus musculus GSE123101 44,372
CTCF mESC INV GEO Mus musculus GSE116790 52,147
CTCF mESC Rod_M_N-P6 GEO Mus musculus GSE109712 11,735
CTCF mESC addback GEO Mus musculus GSE112132 41,206
CTCF mESC EpiLSC GEO Mus musculus GSE92407 53,060
CTCF mESC IAA-pos_I GEO Mus musculus GSE131356 33,995
CTCF mESC IAA-pos_M GEO Mus musculus GSE131356 29,657
CTCF mESC serum GEO Mus musculus GSE92407 44,830
CTCF mESC IAA-neg_I GEO Mus musculus GSE131356 57,357
CTCF mESC IAA-neg_M GEO Mus musculus GSE131356 28,043
CTCF mESC inhibition-4h GEO Mus musculus GSE125595 76,691
CTCF mESC delta-5-6 GEO Mus musculus GSE60232 24,629
CTCF mESC GEO Mus musculus GSE80280 62,836
CTCF mESC C59 GEO Mus musculus GSE90994 75,589
CTCF mESC ZF1d_Rescue GEO Mus musculus GSE125595 62,396
CTCF mESC GEO Mus musculus GSE126362 62,602
CTCF mESC GEO Mus musculus GSE34094 32,181
CTCF mESC 1d GEO Mus musculus GSE126362 60,146
CTCF mESC GEO Mus musculus GSE25777 26,249
CTCF mESC GEO Mus musculus GSE119697 55,872
CTCF mESC GEO Mus musculus GSE18699 24,303
CTCF mESC ser224-P GEO Mus musculus GSE119697 3,589
CTCF mESC bidfing-del GEO Mus musculus GSE123636 66,505
CTCF pro-B-cell GEO Mus musculus GSE21978 39,636
CTCF pro-B-cell GEO Mus musculus GSE47766 42,894
CTCF pro-B-cell IL17 GEO Mus musculus GSE109909 75,652
CTCF pro-B-cell GEO Mus musculus GSE41741 42,893
CTCF lung ENCODE Mus musculus ENCSR000CBV 31,761
CTCF lung ENCODE Mus musculus ENCSR677SIH 59,558
CTCF MC3T3-E1 d28 GEO Mus musculus GSE55045 56,975
CTCF MC3T3-E1 d9 GEO Mus musculus GSE55045 48,540
CTCF MC3T3-E1 d0 GEO Mus musculus GSE55045 72,873
CTCF 3T3-L1 GEO Mus musculus GSE103198 72,282
CTCF 3T3-L1 d-2 GEO Mus musculus GSE21365 33,567
CTCF heart ENCODE Mus musculus ENCSR000CBI 41,426
CTCF heart GEO Mus musculus GSE29218 39,595
CTCF BMM ENCODE Mus musculus ENCSR000CFJ 28,546
CTCF hindlimb GEO Mus musculus GSE42237 35,884
CTCF mammary-gland WT GEO Mus musculus GSE92587 39,681
CTCF mammary-gland delCDE GEO Mus musculus GSE92587 58,711
CTCF mammary-gland delC GEO Mus musculus GSE92587 44,525
CTCF mammary-gland delE GEO Mus musculus GSE92587 73,016
CTCF mammary-gland delD GEO Mus musculus GSE92587 58,697
CTCF mammary-gland delB GEO Mus musculus GSE92591 30,031
CTCF mammary-gland delC GEO Mus musculus GSE92591 25,289
CTCF mammary-gland delA GEO Mus musculus GSE92591 31,927
CTCF mammary-gland delD GEO Mus musculus GSE92591 32,171
CTCF mammary-gland L1 GEO Mus musculus GSE74826 39,717
CTCF limb delattP-Rel5d9lac GEO Mus musculus GSE101714 41,880
CTCF limb del1-13d9lac GEO Mus musculus GSE101714 37,669
CTCF limb GEO Mus musculus GSE42237 3,735
CTCF limb GEO Mus musculus GSE101714 43,137
CTCF limb del8-13rXII GEO Mus musculus GSE101714 33,480
CTCF limb del8-13d11lac GEO Mus musculus GSE101714 57,580
CTCF limb i4 GEO Mus musculus GSE123386 52,410
CTCF limb i4i5ZRSreg GEO Mus musculus GSE123386 70,140
CTCF motor-neuron GEO Mus musculus GSE60232 41,092
CTCF motor-neuron delta-5-6 GEO Mus musculus GSE60232 34,796
CTCF Th2 Ifng-as1-KO GEO Mus musculus GSE132531 7,042
CTCF cardiomyocyte CTCF_KO GEO Mus musculus GSE96691 15,640
CTCF AtT-20 GEO Mus musculus GSE87180 13,732
CTCF NSC p20 GEO Mus musculus GSE76478 67,155
CTCF bone-marrow GEO Mus musculus GSE26257 20,914
CTCF bone-marrow d21 GEO Mus musculus GSE76074 77,034
CTCF bone-marrow young GEO Mus musculus GSE109671 8,517
CTCF bone-marrow ThymoDpA GEO Mus musculus GSE90958 59,319
CTCF bone-marrow d7 GEO Mus musculus GSE76074 61,433
CTCF bone-marrow GEO Mus musculus GSE90958 40,410
CTCF bone-marrow ENCODE Mus musculus ENCSR000CBL 23,274
CTCF bone-marrow GEO Mus musculus GSE143266 23,818
CTCF TSC GEO Mus musculus GSE118399 37,448
CTCF TSC GEO Mus musculus GSE110950 45,204
CTCF Th0 GEO Mus musculus GSE40918 70,343
CTCF proximal-forelimb GEO Mus musculus GSE101714 61,757
CTCF embryonic-liver GEO Mus musculus GSE29218 1,100
CTCF cortical-plate ENCODE Mus musculus ENCSR000CBO 42,792
CTCF mOSN GEO Mus musculus GSE112153 38,125
CTCF mOSN cond1 GEO Mus musculus GSE115862 21,163
CTCF mOSN cond2 GEO Mus musculus GSE115862 11,781
CTCF hindbrain ENCODE Mus musculus ENCSR150RGT 59,241
CTCF olfactory-bulb GEO Mus musculus GSE29218 24,582
CTCF distal-forelimb GEO Mus musculus GSE101714 62,694
CTCF telencephalon GEO Mus musculus GSE105071 30,885
CTCF mature-B-cells GEO Mus musculus GSE27214 33,047
CTCF ES-Bruce4 ENCODE Mus musculus ENCSR000CCB 43,085
CTCF trophoblast-stem-cell GEO Mus musculus GSE39406 56,206
CTCF trophoblast-stem-cell GEO Mus musculus GSE51610 54,445
CTCF forebrain ENCODE Mus musculus ENCSR677HXC 63,462
CTCF erythroid D29 GEO Mus musculus GSE97869 35,928
CTCF embryonic-limb GEO Mus musculus GSE29218 32,876
CTCF cerebellum ENCODE Mus musculus ENCSR000CBN 30,674
CTCF placenta GEO Mus musculus GSE29218 11,475
CTCF cortex M_WT GEO Mus musculus GSE99363 29,555
CTCF neutrophil GEO Mus musculus GSE93127 25,713
CTCF Th1 GEO Mus musculus GSE132531 956
CTCF brown-preadipocyte D0 GEO Mus musculus GSE74189 34,050
CTCF brown-preadipocyte D2 GEO Mus musculus GSE74189 44,831
CTCF brown-preadipocyte D3 GEO Mus musculus GSE74189 42,630
CTCF brown-preadipocyte D7 GEO Mus musculus GSE74189 36,759
CTCF T-cell GEO Mus musculus GSE27214 25,889
CTCF mammary-gland delAB GEO Mus musculus GSE92587 67,027
CTCF heart ENCODE Mus musculus ENCSR491NUM 39,095
CTCF Th2 GEO Mus musculus GSE66343 25,219
CTCF lung ENCODE Mus musculus ENCSR418SBY 66,849
CTCF lung GEO Mus musculus GSE29218 29,401
CTCF lymphoma AZF-mut GEO Mus musculus GSE137216 38,763
CTCF lymphoma mut_Fl-Ctcf_V5 GEO Mus musculus GSE137216 62,906
CTCF lymphoma mut_Fl-Ctcf GEO Mus musculus GSE137216 34,723
CTCF lymphoma N4-mut GEO Mus musculus GSE137216 57,869
CTCF lymphoma mut_Nterm_11ZFs GEO Mus musculus GSE137216 51,479
CTCF lymphoma chimera1 GEO Mus musculus GSE137216 43,641
CTCF lymphoma chimeraAZF_V5 GEO Mus musculus GSE137216 12,628
CTCF lymphoma chimera2 GEO Mus musculus GSE137216 44,041
CTCF lymphoma chimera4 GEO Mus musculus GSE137216 33,608
CTCF lymphoma N2-mut_V5 GEO Mus musculus GSE137216 56,395
CTCF lymphoma 11ZFs-Cterm GEO Mus musculus GSE137216 70,297
CTCF lymphoma Ctcf-mut_V5 GEO Mus musculus GSE137216 35,555
CTCF lymphoma N3-mut GEO Mus musculus GSE137216 72,585
CTCF lymphoma chimeraAZF GEO Mus musculus GSE137216 44,341
CTCF lymphoma N1-mut_V5 GEO Mus musculus GSE137216 68,440
CTCF lymphoma Ctcf-mut GEO Mus musculus GSE137216 52,802
CTCF NIH3T3 GEO Mus musculus GSE36048 33,133
CTCF bone-marrow aged GEO Mus musculus GSE109671 4,453
CTCF bone-marrow GEO Mus musculus GSE29218 22,029
CTCF bone-marrow D2 GEO Mus musculus GSE96548 33,760
CTCF bone-marrow D8 GEO Mus musculus GSE96548 40,361
CTCF bone-marrow D4 GEO Mus musculus GSE96548 23,471
CTCF bone-marrow D6 GEO Mus musculus GSE96548 34,064
CTCF bone-marrow ThymoDpA-pA GEO Mus musculus GSE90958 36,662
CTCF kidney ENCODE Mus musculus ENCSR000CBJ 54,025
CTCF pre-B-cell GEO Mus musculus GSE129526 69,366
CTCF spleen B-cell GEO Mus musculus GSE44637 38,416
CTCF spleen GEO Mus musculus GSE29218 20,825
CTCF spleen ENCODE Mus musculus ENCSR000CBY 22,627
CTCF spleen GEO Mus musculus GSE47492 56,213
CTCF spleen biotag_mZF9 GEO Mus musculus GSE33819 63,767
CTCF spleen biotag_mZF7 GEO Mus musculus GSE33819 53,354
CTCF spleen biotag_mZF6 GEO Mus musculus GSE33819 56,426
CTCF E14TG2a-4 ENCODE Mus musculus ENCSR362VNF 47,610
CTCF intestine GEO Mus musculus GSE29218 40,097
CTCF HSPC BM_Stag2KO GEO Mus musculus GSE138005 53,915
CTCF HSPC BM_Stag2WT GEO Mus musculus GSE138005 61,972
CTCF fibroblast GEO Mus musculus GSE67516 35,187
CTCF MEL dimethyl-sulfoxide_2-percent_5-day ENCODE Mus musculus ENCSR000ETE 56,307
CTCF MEL ENCODE Mus musculus ENCSR000DIP 37,166
CTCF MEL ENCODE Mus musculus ENCSR000ETQ 52,648
CTCF embryonic-midbrain MB-E105 GEO Mus musculus GSE84793 46,933
CTCF limb i4i5ZRS GEO Mus musculus GSE123386 66,359
CTCF limb MB GEO Mus musculus GSE123386 67,429
CTCF MEF mut GEO Mus musculus GSE111820 74,287
CTCF MEF WAPL-fl GEO Mus musculus GSE76303 65,516
CTCF MEF p20 GEO Mus musculus GSE76478 63,180
CTCF MEF CTCF-fl GEO Mus musculus GSE76303 8,070
CTCF MEF Firre-KO GEO Mus musculus GSE104427 14,399
CTCF NPC GEO Mus musculus GSE96107 41,018
CTCF NPC ES-derived GEO Mus musculus GSE99991 64,522
CTCF retina N-E14-5 GEO Mus musculus GSE87037 28,940
CTCF retina N-MDMX GEO Mus musculus GSE87037 15,802
CTCF iPSC Bipo_I_Y-208-03 GEO Mus musculus GSE109712 43,051
CTCF iPSC Bipo_I_Y-208-04 GEO Mus musculus GSE109712 46,103
CTCF iPSC Amac_I_N-rG79-04 GEO Mus musculus GSE109712 23,677
CTCF iPSC Y-7602 GEO Mus musculus GSE87037 28,468
CTCF iPSC Cone_M_N-rCh257-4 GEO Mus musculus GSE109712 37,042
CTCF iPSC Cone_I_Y-209-11 GEO Mus musculus GSE109712 49,242
CTCF iPSC Cone_I_Y-209-13 GEO Mus musculus GSE109712 21,623
CTCF iPSC Amac_M_Y-30-02 GEO Mus musculus GSE109712 29,408
CTCF iPSC Cone_I_Y-209-12 GEO Mus musculus GSE109712 31,553
CTCF iPSC Y-3302 GEO Mus musculus GSE87037 60,969
CTCF liver 5AM GEO Mus musculus GSE104129 63,377
CTCF liver GEO Mus musculus GSE57807 25,510
CTCF liver 5PM GEO Mus musculus GSE104129 68,946
CTCF pro-B-cell GEO Mus musculus GSE40173 30,930
CTCF pro-B-cell GEO Mus musculus GSE27214 51,425
CTCF embryonic-limb-bud FL-E115 GEO Mus musculus GSE84793 48,310
CTCF brain ENCODE Mus musculus ENCSR000CEH 50,412
CTCF brain BC GEO Mus musculus GSE35140 28,869
CTCF BMDC 2h GEO Mus musculus GSE36099 35,533
CTCF BMDC GEO Mus musculus GSE36099 39,024
CTCF mESC DMSO GEO Mus musculus GSE125595 79,517
CTCF mESC serum GEO Mus musculus GSE85185 73,438
CTCF mESC Brg1fl GEO Mus musculus GSE112132 47,509
CTCF mESC auxin2days GEO Mus musculus GSE98671 18,851
CTCF mESC GEO Mus musculus GSE29218 43,217
CTCF mESC RNase GEO Mus musculus GSE125595 58,484
CTCF mESC GEO Mus musculus GSE60232 36,436
CTCF mESC Rod_M_N-P21 GEO Mus musculus GSE109712 20,122
CTCF mESC undifferentiated GEO Mus musculus GSE39502 24,285
CTCF mESC Mock GEO Mus musculus GSE125595 57,195
CTCF mESC 2i GEO Mus musculus GSE92407 55,310
CTCF mESC GEO Mus musculus GSE90994 70,828
CTCF mESC d0 GEO Mus musculus GSE58242 41,347
CTCF mESC Tg2a_I GEO Mus musculus GSE131356 76,695
CTCF mESC d3 GEO Mus musculus GSE58242 27,810
CTCF mESC Tg2a_M GEO Mus musculus GSE131356 45,593
CTCF mESC GEO Mus musculus GSE30203 76,599
CTCF WEHI-231 TFII-1-KD GEO Mus musculus GSE60917 20,849
CTCF HPC-7 TPO-30min GEO Mus musculus GSE100835 38,546
CTCF HPC-7 Ery_Luc GEO Mus musculus GSE129478 55,968
CTCF HPC-7 shStag2 GEO Mus musculus GSE129478 45,464
CTCF G4 INV-DEL GEO Mus musculus GSE116790 26,006
CTCF G4 GEO Mus musculus GSE125293 36,691
CTCF G4 INV GEO Mus musculus GSE116790 72,720
CTCF G1E-ER4 asyn GEO Mus musculus GSE129997 45,544
CTCF G1E-ER4 mid-G1 GEO Mus musculus GSE129997 48,458
CTCF G1E-ER4 GEO Mus musculus GSE80527 32,738
CTCF G1E-ER4 early-G1 GEO Mus musculus GSE129997 46,215
CTCF G1E-ER4 ana-telo GEO Mus musculus GSE129997 45,069
CTCF 3T3-L1 d0 GEO Mus musculus GSE21365 25,782
CTCF 3T3-L1 d2 GEO Mus musculus GSE21365 31,761
CTCF 3T3-L1 d7 GEO Mus musculus GSE21365 26,869
CTCF C2C12 M GEO Mus musculus GSE131356 20,161
CTCF C2C12 I GEO Mus musculus GSE131356 37,380
CTCF CH12 GEO Mus musculus GSE121355 49,672
CTCF CH12 WT GEO Mus musculus GSE121355 37,605
CTCF hippocampus GEO Mus musculus GSE84174 16,280
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks