Dref

Information Dref

Description

The gene DNA replication-related element factor is referred to in FlyBase by the symbol DmelDref (CG5838, FBgn0015664). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2L:9964147..9967229. Its molecular function is described by: RNA polymerase II core promoter sequence-specific DNA binding; calcium ion binding; DNA binding; transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with 15 unique terms, many of which group under: chaeta development; dendrite morphogenesis; programmed cell death; sensory organ precursor cell division; DNA-dependent DNA replication. 24 alleles are reported. The phenotypes of these alleles manifest in: cellular anatomical entity; organelle; wing sensillum; stem cell; acellular anatomical structure. The phenotypic classes of alleles include: increased mortality; cell death defective; mitotic cell cycle defective; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.

Full Name

DNA replication-related element factor

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
4
Biotypes
1
Peaks
48,682
Non-redundant peaks
37,249

TF Classification

Familly
C2H2 zinc finger factors
Sub Familly
BED zinc finger factors

Source JASPAR

External IDs

NCBI Gene
34328
Official Gene Name
Dref
JASPAR
MA1456.1
Ensembl
FBgn0015664
UniProt
Genevisible
RefSeq
NM_078805
Aliases
Dref
All peaks Dref
Download BED file
Non redundant peaks Dref
Download BED file
SEQUENCES Dref
Download FASTA file
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Datasets Table for Dref

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Dref Kc167 HS GEO Drosophila melanogaster GSE62904 9,365
Dref Kc167 NT GEO Drosophila melanogaster GSE62904 4,620
Dref Kc167 mitosis GEO Drosophila melanogaster GSE39664 7,104
Dref Kc167 GEO Drosophila melanogaster GSE39664 27,593
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks