EcR

Information EcR

Description

The gene Ecdysone receptor is referred to in FlyBase by the symbol DmelEcR (CG1765, FBgn0000546). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (3 unique). Gene sequence location is 2R:6087873..6169087. Its molecular function is described by 16 unique terms, many of which group under: binding; DNA-binding transcription factor activity; DNA-binding transcription factor activity, RNA polymerase II-specific; protein binding; steroid binding. It is involved in the biological process described with 51 unique terms, many of which group under: embryo development ending in birth or egg hatching; cuticle development; embryonic development via the syncytial blastoderm; peripheral nervous system development; multicellular organism aging. 160 alleles are reported. The phenotypes of these alleles manifest in: plasma membrane bounded cell projection; midgut primordium; neuromuscular junction; external encapsulating structure; dendritic tree. The phenotypic classes of alleles include: cell death defective; phenotype; visible; size defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 06-18 hour embryonic stages, during late larval stages, during early pupal stages.

Full Name

Ecdysone receptor

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
10
Biotypes
4
Peaks
92,087
Non-redundant peaks
57,228

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
35540
Official Gene Name
EcR
JASPAR
Ensembl
FBgn0000546
UniProt
P34021
Genevisible
P34021
RefSeq
NM_165465
Aliases
EcR
All peaks EcR
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Non redundant peaks EcR
Download BED file
SEQUENCES EcR
Download FASTA file
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Datasets Table for EcR

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
EcR Schneider-2 GEO Drosophila melanogaster GSE122810 712
EcR Schneider-2 GEO Drosophila melanogaster GSE139316 705
EcR adult wing GEO Drosophila melanogaster GSE125604 4,374
EcR adult whole-fly_insertion ENCODE Drosophila melanogaster ENCSR497FYG 28,901
EcR adult whole-fly_insertion ENCODE Drosophila melanogaster ENCSR377EUZ 19,681
EcR adult whole-fly_insertion ENCODE Drosophila melanogaster ENCSR566ZYE 24,337
EcR Kc167 20-HE GEO Drosophila melanogaster GSE118047 1,973
EcR Kc167 GEO Drosophila melanogaster GSE118047 3,441
EcR prepupa WPP GEO Drosophila melanogaster GSE20000 4,435
EcR prepupa WPP30-33 GEO Drosophila melanogaster GSE20000 3,528
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks