FLC

Information FLC

Description

MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3? to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.

Full Name

K-box region and MADS-box transcription factor family protein

Source NCBI

Species

Arabidopsis thaliana [tax_id: 3702]

Genome

TAIR10

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
935
Non-redundant peaks
935

TF Classification

Familly
MADS
Sub Familly
MADS box protein FLOWERING LOCUS F (FLF)

Source AtTFDB

External IDs

NCBI Gene
830878
Official Gene Name
FLC
JASPAR
MA0558
Ensembl
AT5G10140
UniProt
Q9S7Q7
Genevisible
Q9S7Q7
RefSeq
NM_121052.3
Aliases
All peaks FLC
Download BED file
Non redundant peaks FLC
Download BED file
SEQUENCES FLC
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for FLC

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
FLC Col-FRI Col-FRI_aerial-part 2w GEO Arabidopsis thaliana GSE89889 935
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks