GABPA
Information GABPA
- Description
This gene encodes one of three GA-binding protein transcription factor subunits which functions as a DNA-binding subunit. Since this subunit shares identity with a subunit encoding the nuclear respiratory factor 2 gene, it is likely involved in activation of cytochrome oxidase expression and nuclear control of mitochondrial function. This subunit also shares identity with a subunit constituting the transcription factor E4TF1, responsible for expression of the adenovirus E4 gene. Because of its chromosomal localization and ability to form heterodimers with other polypeptides, this gene may play a role in the Down Syndrome phenotype. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Oct 2010]
- Full Name
GA binding protein transcription factor subunit alpha
Source NCBI
- Species
Homo sapiens [tax_id: 9606]
- Genome
hg38
ReMap Statistics
- Datasets
- 24
- Biotypes
- 15
- Peaks
- 414,982
- Non-redundant peaks
- 208,239
TF Classification
- Super Class
- Helix-turn-helix domains
- Class
- Tryptophan cluster factors
- Familly
- Ets-related factors
- Sub Familly
- Ets-like factors
Source TFClass
External IDs
- NCBI Gene
- 2551
- Official Gene Name
- GABPA
- JASPAR
- MA0062
- Ensembl
- ENSG00000154727
- UniProt
- Q06546
- Genevisible
- Q06546
- RefSeq
- NM_001197297
- Aliases
- E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
Datasets Table for GABPA
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
GABPA | RWPE-1 | GEO | Homo sapiens | GSE29808 | 2,684 | |||
GABPA | DU145 | GEO | Homo sapiens | GSE59021 | 3,116 | |||
GABPA | VCaP | R1881 | GEO | Homo sapiens | GSE49091 | 56,726 | ||
GABPA | VCaP | ETOH | GEO | Homo sapiens | GSE49091 | 52,956 | ||
GABPA | VCaP | GEO | Homo sapiens | GSE49091 | 54,951 | |||
GABPA | THP-1 | calcitriol_100nM_1d | GEO | Homo sapiens | GSE98093 | 953 | ||
GABPA | THP-1 | EtOH_1d | GEO | Homo sapiens | GSE98093 | 1,230 | ||
GABPA | HeLa | GEO | Homo sapiens | GSE31417 | 2,957 | |||
GABPA | Hep-G2 | GEO | Homo sapiens | GSE72082 | 16,630 | |||
GABPA | WA01 | ENCODE | Homo sapiens | ENCSR000BIW | 31,200 | |||
GABPA | SK-N-SH | ENCODE | Homo sapiens | ENCSR000BTG | 11,727 | |||
GABPA | MCF-7 | ENCODE | Homo sapiens | ENCSR000BUK | 17,387 | |||
GABPA | K-562 | ENCODE | Homo sapiens | ENCSR000BLO | 34,765 | |||
GABPA | K-562 | ENCODE | Homo sapiens | ENCSR290MUH | 16,837 | |||
GABPA | HL-60 | ENCODE | Homo sapiens | ENCSR000BTK | 8,471 | |||
GABPA | Hep-G2 | ENCODE | Homo sapiens | ENCSR269TNX | 16,186 | |||
GABPA | Hep-G2 | ENCODE | Homo sapiens | ENCSR000BJK | 8,878 | |||
GABPA | A-549 | ENCODE | Homo sapiens | ENCSR000BPY | 19,994 | |||
GABPA | liver | ENCODE | Homo sapiens | ENCSR350ORK | 6,911 | |||
GABPA | liver | ENCODE | Homo sapiens | ENCSR038GMB | 21,571 | |||
GABPA | MCF-7 | GEO | Homo sapiens | GSE72082 | 1,759 | |||
GABPA | GM12878 | ENCODE | Homo sapiens | ENCSR000BGC | 4,565 | |||
GABPA | GM12878 | ENCODE | Homo sapiens | ENCSR331HPA | 12,636 | |||
GABPA | HeLa-S3 | ENCODE | Homo sapiens | ENCSR000BHS | 9,892 | |||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |