HMGA1
Information HMGA1
- Description
This gene encodes a chromatin-associated protein involved in the regulation of gene transcription, integration of retroviruses into chromosomes, and the metastatic progression of cancer cells. The encoded protein preferentially binds to the minor groove of AT-rich regions in double-stranded DNA. Multiple transcript variants encoding different isoforms have been found for this gene. Pseudogenes of this gene have been identified on multiple chromosomes. [provided by RefSeq, Jan 2016]
- Full Name
high mobility group AT-hook 1
Source NCBI
- Species
Homo sapiens [tax_id: 9606]
- Genome
hg38
ReMap Statistics
- Datasets
- 2
- Biotypes
- 1
- Peaks
- 81,240
- Non-redundant peaks
- 69,104
TF Classification
- Super Class
- NA
- Class
- NA
- Familly
- NA
- Sub Familly
- NA
Source TFClass
External IDs
- NCBI Gene
- 3159
- Official Gene Name
- HMGA1
- JASPAR
- Ensembl
- ENSG00000137309
- UniProt
- P17096
- Genevisible
- P17096
- RefSeq
- NM_001319077
- Aliases
- HMG-R; HMGA1A; HMGIY
Datasets Table for HMGA1
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| HMGA1 | IMR-90 | RAS-induced | GEO | Homo sapiens | GSE111841 | 55,216 | ||
| HMGA1 | IMR-90 | ctrl | GEO | Homo sapiens | GSE111841 | 26,024 | ||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |