HNRNPK

Information HNRNPK

Description

This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene is located in the nucleoplasm and has three repeats of KH domains that binds to RNAs. It is distinct among other hnRNP proteins in its binding preference; it binds tenaciously to poly(C). This protein is also thought to have a role during cell cycle progession. Several alternatively spliced transcript variants have been described for this gene, however, not all of them are fully characterized. [provided by RefSeq, Jul 2008]

Full Name

heterogeneous nuclear ribonucleoprotein K

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
5
Biotypes
3
Peaks
160,702
Non-redundant peaks
75,991

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
3190
Official Gene Name
HNRNPK
JASPAR
Ensembl
ENSG00000165119
UniProt
P61978
Genevisible
P61978
RefSeq
NM_001318186
Aliases
AUKS; CSBP; HNRPK; TUNP
All peaks HNRNPK
Download BED file
Non redundant peaks HNRNPK
Download BED file
SEQUENCES HNRNPK
Download FASTA file
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Datasets Table for HNRNPK

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
HNRNPK Hep-G2 GEO Homo sapiens GSE120104 62,981
HNRNPK K-562 GEO Homo sapiens GSE120104 22,426
HNRNPK K-562 ENCODE Homo sapiens ENCSR014RCS 20,183
HNRNPK Hep-G2 ENCODE Homo sapiens ENCSR519QAA 51,249
HNRNPK primary-keratinocyte GEO Homo sapiens GSE122327 3,863
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks