HY5
Information HY5
- Description
Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.
- Full Name
Basic-leucine zipper (bZIP) transcription factor family protein
Source NCBI
- Species
Arabidopsis thaliana [tax_id: 3702]
- Genome
TAIR10
ReMap Statistics
- Datasets
- 8
- Biotypes
- 3
- Peaks
- 83,670
- Non-redundant peaks
- 41,185
TF Classification
- Familly
- REM
- Sub Familly
- NA
Source AtTFDB
Datasets Table for HY5
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
HY5 | Ws | Ws_whole-plant | 10d-blue-light | GEO | Arabidopsis thaliana | GSE117797 | 14,494 | |
HY5 | Ws | Ws_whole-plant | bluelight_insertion | GEO | Arabidopsis thaliana | GSE117797 | 7,673 | |
HY5 | Ws | Ws_whole-plant | 10d-red-light | GEO | Arabidopsis thaliana | GSE117797 | 9,536 | |
HY5 | Col-0 | Col-0_leaves | tnt_colamp | GEO | Arabidopsis thaliana | GSE60141 | 5,003 | |
HY5 | Col | Col_seedling | GEO | Arabidopsis thaliana | GSE132860 | 8,384 | ||
HY5 | Col | Col_seedling | SRDX | GEO | Arabidopsis thaliana | GSE132860 | 5,250 | |
HY5 | Col | Col_seedling | VP16 | GEO | Arabidopsis thaliana | GSE132860 | 11,196 | |
HY5 | Col | Col_seedling | ox | GEO | Arabidopsis thaliana | GSE132860 | 22,134 | |
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |