HY5

Information HY5

Description

Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.

Full Name

Basic-leucine zipper (bZIP) transcription factor family protein

Source NCBI

Species

Arabidopsis thaliana [tax_id: 3702]

Genome

TAIR10

ReMap Statistics

Datasets
8
Biotypes
3
Peaks
83,670
Non-redundant peaks
41,185

TF Classification

Familly
REM
Sub Familly
NA

Source AtTFDB

External IDs

NCBI Gene
830996
Official Gene Name
HY5
JASPAR
MA0551
Ensembl
AT5G11260
UniProt
O24646
Genevisible
O24646
RefSeq
NM_121164.5
Aliases
All peaks HY5
Download BED file
Non redundant peaks HY5
Download BED file
SEQUENCES HY5
Download FASTA file
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Datasets Table for HY5

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
HY5 Ws Ws_whole-plant 10d-blue-light GEO Arabidopsis thaliana GSE117797 14,494
HY5 Ws Ws_whole-plant bluelight_insertion GEO Arabidopsis thaliana GSE117797 7,673
HY5 Ws Ws_whole-plant 10d-red-light GEO Arabidopsis thaliana GSE117797 9,536
HY5 Col-0 Col-0_leaves tnt_colamp GEO Arabidopsis thaliana GSE60141 5,003
HY5 Col Col_seedling GEO Arabidopsis thaliana GSE132860 8,384
HY5 Col Col_seedling SRDX GEO Arabidopsis thaliana GSE132860 5,250
HY5 Col Col_seedling VP16 GEO Arabidopsis thaliana GSE132860 11,196
HY5 Col Col_seedling ox GEO Arabidopsis thaliana GSE132860 22,134
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks