Jarid2
Information Jarid2
- Description
The gene Jumonji, AT rich interactive domain 2 is referred to in FlyBase by the symbol DmelJarid2 (CG3654, FBgn0036004). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3L:9477038..9486530. Its molecular function is described by: DNA binding; histone demethylase activity (H3-K9 specific); histone demethylase activity (H3-K36 specific); histone demethylase activity. It is involved in the biological process described with: regulation of histone H3-K27 methylation; chromatin remodeling. 22 alleles are reported. The phenotypes of these alleles manifest in: leg; embryonic/larval hemocyte; wing vein; polytene chromosome. The phenotypic classes of alleles include: increased mortality; increased mortality during development; phenotype; lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages.
- Full Name
Jumonji, AT rich interactive domain 2
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 4
- Biotypes
- 2
- Peaks
- 46,184
- Non-redundant peaks
- 35,969
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 39103
- Official Gene Name
- Jarid2
- JASPAR
- Ensembl
- FBgn0036004
- UniProt
- Genevisible
- RefSeq
- NM_140067
- Aliases
- Jarid2
Datasets Table for Jarid2
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| Jarid2 | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR388YUZ | 24,614 | ||
| Jarid2 | third-instar | GEO | Drosophila melanogaster | GSE33546 | 13,764 | |||
| Jarid2 | third-instar | mb | GEO | Drosophila melanogaster | GSE33546 | 3,499 | ||
| Jarid2 | third-instar | e0 | GEO | Drosophila melanogaster | GSE33546 | 4,307 | ||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |