Lpt

Information Lpt

Description

The gene Lost PHDs of trr is referred to in FlyBase by the symbol DmelLpt (CG5591, FBgn0263667). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is 2R:23898561..23903661. Its molecular function is described by 6 unique terms, many of which group under: binding; molecular function regulator; transcription regulator activity; transcription coactivator activity; chromatin binding. It is involved in the biological process described with 8 unique terms, many of which group under: positive regulation of histone H3-K9 methylation; molting cycle; intracellular steroid hormone receptor signaling pathway; nucleobase-containing compound biosynthetic process; positive regulation of RNA biosynthetic process. 13 alleles are reported. The phenotypes of these alleles manifest in: eye; cephalopharyngeal skeleton; eo-type sensillum; embryonic/larval circulatory system; sensory organ cell. The phenotypic classes of alleles include: increased mortality; increased mortality during development; phenotype; some die during larval stage.

Full Name

Lost PHDs of trr

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
9
Biotypes
3
Peaks
77,853
Non-redundant peaks
33,825

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
37795
Official Gene Name
Lpt
JASPAR
Ensembl
FBgn0263667
UniProt
Genevisible
RefSeq
NM_138003
Aliases
Lpt
All peaks Lpt
Download BED file
Non redundant peaks Lpt
Download BED file
SEQUENCES Lpt
Download FASTA file
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Datasets Table for Lpt

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Lpt Schneider-2 GEO Drosophila melanogaster GSE41440 8,764
Lpt Schneider-2 WT GEO Drosophila melanogaster GSE41440 7,810
Lpt Schneider-2 GEO Drosophila melanogaster GSE143747 4,954
Lpt adult whole-fly_insertion ENCODE Drosophila melanogaster ENCSR376EUJ 7,044
Lpt adult 2-4d_brain_ca_homemade GEO Drosophila melanogaster GSE95781 7,715
Lpt adult brain_WT_homemade GEO Drosophila melanogaster GSE95781 7,730
Lpt adult 2-4d_brain_yf_homemade GEO Drosophila melanogaster GSE95781 7,173
Lpt adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR303EBD 21,246
Lpt third-instar GEO Drosophila melanogaster GSE143747 5,417
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks