NR3C1

Information NR3C1

Description

This gene encodes glucocorticoid receptor, which can function both as a transcription factor that binds to glucocorticoid response elements in the promoters of glucocorticoid responsive genes to activate their transcription, and as a regulator of other transcription factors. This receptor is typically found in the cytoplasm, but upon ligand binding, is transported into the nucleus. It is involved in inflammatory responses, cellular proliferation, and differentiation in target tissues. Mutations in this gene are associated with generalized glucocorticoid resistance. Alternative splicing of this gene results in transcript variants encoding either the same or different isoforms. Additional isoforms resulting from the use of alternate in-frame translation initiation sites have also been described, and shown to be functional, displaying diverse cytoplasm-to-nucleus trafficking patterns and distinct transcriptional activities (PMID:15866175). [provided by RefSeq, Feb 2011]

Full Name

nuclear receptor subfamily 3 group C member 1

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
88
Biotypes
32
Peaks
1,660,139
Non-redundant peaks
489,709

TF Classification

Super Class
Zinc-coordinating DNA-binding domains
Class
Nuclear receptors with C4 zinc fingers
Familly
Steroid hormone receptors (NR3)
Sub Familly
GR-like receptors (NR3C)

Source TFClass

External IDs

NCBI Gene
2908
Official Gene Name
NR3C1
JASPAR
MA0113
Ensembl
ENSG00000113580
UniProt
P04150
Genevisible
P04150
RefSeq
NM_000176
Aliases
GCCR; GCR; GCRST; GR; GRL
All peaks NR3C1
Download BED file
Non redundant peaks NR3C1
Download BED file
SEQUENCES NR3C1
Download FASTA file
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Datasets Table for NR3C1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
NR3C1 BEAS-2B shNR3C1_TNF-DEX_IA1 GEO Homo sapiens GSE125623 18,067
NR3C1 BEAS-2B DEX_IA1 GEO Homo sapiens GSE125623 39,412
NR3C1 BEAS-2B TNF-DEX_IA1 GEO Homo sapiens GSE125623 26,308
NR3C1 MCF-7 GEO Homo sapiens GSE104399 7,841
NR3C1 MCF-7 E2_Dex GEO Homo sapiens GSE81510 41,078
NR3C1 MCF-7 ICI_Dex GEO Homo sapiens GSE81510 34,276
NR3C1 MCF-7 GEO Homo sapiens GSE72249 788
NR3C1 mut MCF-7 ICI_Dex GEO Homo sapiens GSE81510 24,527
NR3C1 mut MCF-7 E2_Dex GEO Homo sapiens GSE81510 18,751
NR3C1 MCF-7 GEO Homo sapiens GSE152203 29,409
NR3C1 MDA-MB-361 GEO Homo sapiens GSE152203 13,062
NR3C1 Ishikawa GEO Homo sapiens GSE109891 1,768
NR3C1 Ishikawa Dex GEO Homo sapiens GSE109891 12,076
NR3C1 Ishikawa Dex_E2 GEO Homo sapiens GSE109891 8,085
NR3C1 macrophage veh GEO Homo sapiens GSE109438 1,122
NR3C1 macrophage TA GEO Homo sapiens GSE109438 4,273
NR3C1 ZR751 GEO Homo sapiens GSE72249 4,589
NR3C1 ZR751 DEX GEO Homo sapiens GSE72249 19,466
NR3C1 IMR-90 GLUCC ENA Homo sapiens ERP007081 42,052
NR3C1 IMR-90 ENA Homo sapiens ERP007093 44,778
NR3C1 HCC70 GEO Homo sapiens GSE152203 18,900
NR3C1 THP-1 GEO Homo sapiens GSE99887 871
NR3C1 THP-1 Dex GEO Homo sapiens GSE99887 16,037
NR3C1 monocyte TA GEO Homo sapiens GSE109438 994
NR3C1 MCF-10A EGF_DEX_60min GEO Homo sapiens GSE102355 9,214
NR3C1 MCF-10A DEX_20min GEO Homo sapiens GSE102355 5,897
NR3C1 MCF-10A EGF_DEX_20min GEO Homo sapiens GSE102355 11,806
NR3C1 MCF-10A DEX_60min GEO Homo sapiens GSE102355 12,216
NR3C1 T-47D DEX GEO Homo sapiens GSE72249 732
NR3C1 T-47D GEO Homo sapiens GSE72249 158
NR3C1 T-47D GEO Homo sapiens GSE126859 4,187
NR3C1 T-47D R5020 GEO Homo sapiens GSE126859 6,783
NR3C1 HCC1937 GEO Homo sapiens GSE152203 33,674
NR3C1 LCL DEX GEO Homo sapiens GSE45638 3,173
NR3C1 LCL ETOH GEO Homo sapiens GSE45638 55
NR3C1 BT-474 GEO Homo sapiens GSE152203 3,184
NR3C1 K-562 GLUCC ENA Homo sapiens ERP007081 18,648
NR3C1 LNCaP 1F5_SIFOXA1 GEO Homo sapiens GSE30623 16,660
NR3C1 LNCaP 1F5 GEO Homo sapiens GSE30623 10,779
NR3C1 MDA-MB-231 GEO Homo sapiens GSE152203 31,426
NR3C1 SUP-B15 DEX GEO Homo sapiens GSE107584 25,229
NR3C1 K-562 ENCODE Homo sapiens ENCSR325DER 654
NR3C1 K-562 ENCODE Homo sapiens ENCSR494UQJ 1,635
NR3C1 Hep-G2 ENCODE Homo sapiens ENCSR000EEV 351
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BJT 8,579
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BHE 15,613
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BHG 37,433
NR3C1 A-549 ENCODE Homo sapiens ENCSR116TFA 12,052
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BJR 77,012
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BIO 240
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BHF 79,631
NR3C1 BEAS-2B DEX GEO Homo sapiens GSE125623 31,470
NR3C1 BEAS-2B shNR3C1_TNF_IA1 GEO Homo sapiens GSE125623 35,925
NR3C1 BEAS-2B Veh_IA1 GEO Homo sapiens GSE125623 58,851
NR3C1 BEAS-2B TNF_IA1 GEO Homo sapiens GSE125623 67,090
NR3C1 BEAS-2B TNF-DEX GEO Homo sapiens GSE125623 5,665
NR3C1 BEAS-2B DEX GEO Homo sapiens GSE135127 3,854
NR3C1 BEAS-2B shNR3C1_Veh_IA1 GEO Homo sapiens GSE125623 29,801
NR3C1 Ishikawa ENCODE Homo sapiens ENCSR000BJC 56,561
NR3C1 Ishikawa ENCODE Homo sapiens ENCSR000BLB 8,158
NR3C1 MCF-7 DEX GEO Homo sapiens GSE72249 13,786
NR3C1 GM12878 ENCODE Homo sapiens ENCSR904YPP 15,749
NR3C1 MDA-MB-453 GEO Homo sapiens GSE152203 27,047
NR3C1 NALM-6 CASP1 GEO Homo sapiens GSE67046 5,337
NR3C1 NALM-6 GEO Homo sapiens GSE67046 15,822
NR3C1 SUM159PT GEO Homo sapiens GSE152203 73,446
NR3C1 breast tumor_Male_12 GEO Homo sapiens GSE104399 1,911
NR3C1 breast tumor_Male_15 GEO Homo sapiens GSE104399 10,938
NR3C1 breast tumor_Male_9 GEO Homo sapiens GSE104399 5,304
NR3C1 breast tumor_Male_1 GEO Homo sapiens GSE104399 5,970
NR3C1 breast tumor_Male_21 GEO Homo sapiens GSE104399 23,862
NR3C1 hMSC DMI GEO Homo sapiens GSE68864 5,682
NR3C1 U2OS SHNS GEO Homo sapiens GSE65847 16,958
NR3C1 U2OS SHHIC5 GEO Homo sapiens GSE65847 55,010
NR3C1 U2OS siHic5siNS GEO Homo sapiens GSE109383 16,987
NR3C1 U2OS GLUCC ENA Homo sapiens ERP007081 34,982
NR3C1 U2OS siBRMsiHic5 GEO Homo sapiens GSE109383 8,363
NR3C1 HeLa-B2 TA_TNFA GEO Homo sapiens GSE24518 9,263
NR3C1 HeLa-B2 TA GEO Homo sapiens GSE24518 11,130
NR3C1 HeLa-B2 DMSO GEO Homo sapiens GSE24518 449
NR3C1 HeLa-B2 P65KD_TA_TNFA GEO Homo sapiens GSE24518 29,089
NR3C1 HeLa-B2 P65KD_DMSO GEO Homo sapiens GSE24518 9,108
NR3C1 HeLa-B2 GRKD_TA_TNFA GEO Homo sapiens GSE24518 15,536
NR3C1 HeLa-B2 GRKD_DMSO GEO Homo sapiens GSE24518 14,498
NR3C1 HeLa-B2 TNFA GEO Homo sapiens GSE24518 437
NR3C1 T47D-A1-2 Dex GEO Homo sapiens GSE112491 50,793
NR3C1 RS4-11 DEX GEO Homo sapiens GSE71616 1,123
NR3C1 ALL DEX GEO Homo sapiens GSE109946 28,633
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks