Nup98-96

Information Nup98-96

Description

The gene Nucleoporin 98-96kD is referred to in FlyBase by the symbol DmelNup98-96 (CG10198, FBgn0039120). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 3R:23774225..23781621. Its molecular function is described by: structural constituent of nuclear pore; protein binding; promoter-specific chromatin binding; chromatin DNA binding. It is involved in the biological process described with 17 unique terms, many of which group under: response to chemical; multicellular organismal process; nuclear transport; nucleocytoplasmic transport; response to abiotic stimulus. 15 alleles are reported. The phenotypes of these alleles manifest in: cell component; embryonic/larval circulatory system; nurse cell spectrosome; ovary; female reproductive system. The phenotypic classes of alleles include: short lived; viable; lethal; lethal - all die during P-stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages.

Full Name

Nucleoporin 98-96kD

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
18,065
Non-redundant peaks
17,065

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
42816
Official Gene Name
Nup98-96
JASPAR
Ensembl
FBgn0039120
UniProt
Q9VCH5
Genevisible
Q9VCH5
RefSeq
NM_142930
Aliases
Nup98-96
All peaks Nup98-96
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Non redundant peaks Nup98-96
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SEQUENCES Nup98-96
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Datasets Table for Nup98-96

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Nup98-96 Kc167 GEO Drosophila melanogaster GSE80700 16,742
Nup98-96 third-instar brain GEO Drosophila melanogaster GSE94922 1,323
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks