PRDM16

Information PRDM16

Description

Binds DNA and functions as a transcriptional regulator (PubMed:18483224). Displays histone methyltransferase activity and monomethylates 'Lys-9' of histone H3 (H3K9me1) in vitro (PubMed:22939622). Probably catalyzes the monomethylation of free histone H3 in the cytoplasm which is then transported to the nucleus and incorporated into nucleosomes where SUV39H methyltransferases use it as a substrate to catalyze histone H3 'Lys-9' trimethylation (PubMed:22939622). Likely to be one of the primary histone methyltransferases along with MECOM/PRDM3 that direct cytoplasmic H3K9me1 methylation (PubMed:22939622). Functions in the differentiation of brown adipose tissue (BAT) which is specialized in dissipating chemical energy in the form of heat in response to cold or excess feeding while white adipose tissue (WAT) is specialized in the storage of excess energy and the control of systemic metabolism (PubMed:17618855, PubMed:18483224). Together with CEBPB, regulates the differentiation of myoblastic precursors into brown adipose cells (PubMed:18719582, PubMed:19641492). Functions as a repressor of TGF-beta signaling. {ECO:0000269|PubMed:17618855, ECO:0000269|PubMed:18483224, ECO:0000269|PubMed:18719582, ECO:0000269|PubMed:19641492, ECO:0000269|PubMed:22939622}.(Source UnitProtKB).

Full Name

PR domain containing 16

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
47,931
Non-redundant peaks
38,014

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
70673
Official Gene Name
Prdm16
JASPAR
MGI
MGI:1917923
Ensembl
ENSMUSG00000039410
UniProt
A2A935
Genevisible
A2A935
RefSeq
NM_027504
Aliases
5730557K01Rik; Mel1; csp1; line 27
All peaks PRDM16
Download BED file
Non redundant peaks PRDM16
Download BED file
SEQUENCES PRDM16
Download FASTA file
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Datasets Table for PRDM16

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
PRDM16 brown-adipose-tissue GEO Mus musculus GSE103434 35,445
PRDM16 BAT GEO Mus musculus GSE63965 11,812
PRDM16 BAT GEO Mus musculus GSE86017 674
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks