Pif1A

Information Pif1A

Description

The gene PFTAIRE-interacting factor 1A is referred to in FlyBase by the symbol DmelPif1A (CG42599, FBgn0261015). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (4 unique). Gene sequence location is 3R:8774286..8801176. Its molecular function is unknown. The biological processes in which it is involved are not known. 19 alleles are reported. The phenotypes of these alleles manifest in: external sensillum; sperm individualization complex; organelle; adult mesothoracic segment; cell. The phenotypic classes of alleles include: decreased cell number; male sterile; viable; female fertile; size defective; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed during late pupal stages, in adult male stages. This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene. The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined.

Full Name

PFTAIRE-interacting factor 1A

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
24,565
Non-redundant peaks
24,565

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
8674049
Official Gene Name
Pif1A
JASPAR
Ensembl
FBgn0261015
UniProt
Genevisible
RefSeq
NM_001316487
Aliases
Pif1A
All peaks Pif1A
Download BED file
Non redundant peaks Pif1A
Download BED file
SEQUENCES Pif1A
Download FASTA file
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Datasets Table for Pif1A

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Pif1A adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR945XEH 24,565
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks