RBM39

Information RBM39

Description

This gene encodes a member of the U2AF65 family of proteins. The encoded protein is found in the nucleus, where it co-localizes with core spliceosomal proteins. It has been shown to play a role in both steroid hormone receptor-mediated transcription and alternative splicing, and it is also a transcriptional coregulator of the viral oncoprotein v-Rel. Multiple transcript variants have been observed for this gene. A related pseudogene has been identified on chromosome X. [provided by RefSeq, Aug 2011]

Full Name

RNA binding motif protein 39

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
4
Biotypes
2
Peaks
156,112
Non-redundant peaks
89,196

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
9584
Official Gene Name
RBM39
JASPAR
Ensembl
ENSG00000131051
UniProt
Q14498
Genevisible
Q14498
RefSeq
NM_001242599
Aliases
CAPER; CAPERalpha; CC1.3; FSAP59; HCC1; RNPC2; fSAP59
All peaks RBM39
Download BED file
Non redundant peaks RBM39
Download BED file
SEQUENCES RBM39
Download FASTA file
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Datasets Table for RBM39

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
RBM39 Hep-G2 GEO Homo sapiens GSE120104 51,415
RBM39 K-562 GEO Homo sapiens GSE120104 27,466
RBM39 K-562 ENCODE Homo sapiens ENCSR764OXF 29,418
RBM39 Hep-G2 ENCODE Homo sapiens ENCSR339JTP 47,813
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks