Sce

Information Sce

Description

The gene Sex combs extra is referred to in FlyBase by the symbol DmelSce (CG5595, FBgn0003330). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3R:27680431..27682029. Its molecular function is described by: ubiquitin-protein transferase activity; chromatin binding; zinc ion binding; protein binding; ubiquitin protein ligase activity. It is involved in the biological process described with 8 unique terms, many of which group under: developmental process; multicellular organism development; multi-organism reproductive process; tissue development; system development. 22 alleles are reported. The phenotypes of these alleles manifest in: ovariole; germarium; larval abdominal segment 2; abdominal segment 3; eye disc. The phenotypic classes of alleles include: locomotor behavior defective; some die during embryonic stage; lethal; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.

Full Name

Sex combs extra

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
25,108
Non-redundant peaks
19,957

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
43327
Official Gene Name
Sce
JASPAR
Ensembl
FBgn0003330
UniProt
Q9VB08
Genevisible
Q9VB08
RefSeq
NM_058161
Aliases
Sce
All peaks Sce
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Non redundant peaks Sce
Download BED file
SEQUENCES Sce
Download FASTA file
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Datasets Table for Sce

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Sce S2-DRSC abd-A-HA GEO Drosophila melanogaster GSE101554 11,627
Sce S2-DRSC GEO Drosophila melanogaster GSE101554 13,481
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks