Sgf11

Information Sgf11

Description

The gene SAGA associated factor 11kDa is referred to in FlyBase by the symbol DmelSgf11 (CG13379, FBgn0036804). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3L:18681037..18681836. Its molecular function is described by: protein binding; transcription coactivator activity. It is involved in the biological process described with: regulation of transcription, DNA-templated; regulation of transcription by RNA polymerase II; chromatin organization; histone deubiquitination; positive regulation of transcription, DNA-templated. 7 alleles are reported. The phenotypes of these alleles manifest in: ventral interface glial cell; mesothoracic tergum; dorsal interface glial cell. The phenotypic classes of alleles include: neuroanatomy defective; lethal; viable; body color defective; enhancer of variegation; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during early pupal stages, in adult female stages.

Full Name

SAGA associated factor 11kDa

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
14,319
Non-redundant peaks
9,191

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
40035
Official Gene Name
Sgf11
JASPAR
Ensembl
FBgn0036804
UniProt
Q9VVR6
Genevisible
Q9VVR6
RefSeq
NM_001104168
Aliases
Sgf11
All peaks Sgf11
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Non redundant peaks Sgf11
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SEQUENCES Sgf11
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Datasets Table for Sgf11

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Sgf11 embryo 1h-3h_1924 GEO Drosophila melanogaster GSE98862 7,209
Sgf11 embryo 1h-3h_1377 GEO Drosophila melanogaster GSE98862 7,110
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks