Su-var-2-10

Information Su-var-2-10

Description

The gene Suppressor of variegation 2-10 is referred to in FlyBase by the symbol DmelSu(var)2-10 (CG8068, FBgn0003612). It is a protein_coding_gene from Dmel. It has 14 annotated transcripts and 14 polypeptides (all unique). Gene sequence location is 2R:9116122..9122000. Its molecular function is described by: SUMO ligase activity; zinc ion binding; RNA polymerase II transcription factor binding; STAT family protein binding; transcription coregulator activity. It is involved in the biological process described with 12 unique terms, many of which group under: cellular component organization or biogenesis; cellular nitrogen compound metabolic process; anatomical structure development; cellular response to stress; negative regulation of receptor signaling pathway via JAK-STAT. 34 alleles are reported. The phenotypes of these alleles manifest in: adult head sensillum; adult external thorax; neuroblast; ovariole; gut. The phenotypic classes of alleles include: phenotype; size defective; increased mortality; melanotic mass phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, in adult female stages.

Full Name

Suppressor of variegation 2-10

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
16,097
Non-redundant peaks
16,097

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
35927
Official Gene Name
Su(var)2-10
JASPAR
Ensembl
FBgn0003612
UniProt
Genevisible
RefSeq
NM_165652
Aliases
Su(var)2-10
All peaks Su-var-2-10
Download BED file
Non redundant peaks Su-var-2-10
Download BED file
SEQUENCES Su-var-2-10
Download FASTA file
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Datasets Table for Su-var-2-10

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Su-var-2-10 adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR637GDK 16,097
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks