Su-var-205

Information Su-var-205

Description

The gene Suppressor of variegation 205 is referred to in FlyBase by the symbol DmelSu(var)205 (CG8409, FBgn0003607). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2L:8209626..8211122. Its molecular function is described by 8 unique terms, many of which group under: binding; heterocyclic compound binding; organic cyclic compound binding; nucleic acid binding; protein binding. It is involved in the biological process described with 18 unique terms, many of which group under: positive regulation of histone modification; regulation of programmed cell death; mitotic cell cycle; programmed cell death; cell cycle. 89 alleles are reported. The phenotypes of these alleles manifest in: intracellular anatomical structure; polytene chromosome; ganglion; visual system; chromosome. The phenotypic classes of alleles include: increased mortality; increased mortality during development; suppressor of variegation; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during early pupal stages.

Full Name

Suppressor of variegation 205

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
14
Biotypes
4
Peaks
229,479
Non-redundant peaks
88,038

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
34119
Official Gene Name
Su(var)205
JASPAR
Ensembl
FBgn0003607
UniProt
P05205
Genevisible
P05205
RefSeq
NM_164799
Aliases
Su(var)205
All peaks Su-var-205
Download BED file
Non redundant peaks Su-var-205
Download BED file
SEQUENCES Su-var-205
Download FASTA file
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Datasets Table for Su-var-205

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Su-var-205 Schneider-2 priming GEO Drosophila melanogaster GSE56101 5,330
Su-var-205 ovarian-somatic-cell ctrl_C1A9-DSHB GEO Drosophila melanogaster GSE81434 3,169
Su-var-205 adult head_Top3bWT_complementation GEO Drosophila melanogaster GSE119777 14,931
Su-var-205 adult head_AGO2-mut GEO Drosophila melanogaster GSE119777 8,764
Su-var-205 adult head_Top3b26 GEO Drosophila melanogaster GSE119777 32,090
Su-var-205 adult head_Top3b26_AGO2-mut GEO Drosophila melanogaster GSE119777 27,347
Su-var-205 adult whole-fly ENCODE Drosophila melanogaster ENCSR857XGK 11,850
Su-var-205 adult head_w1118_complementation GEO Drosophila melanogaster GSE119777 15,405
Su-var-205 adult head_Top3bY332F_complementation GEO Drosophila melanogaster GSE119777 19,420
Su-var-205 adult head_w1118 GEO Drosophila melanogaster GSE119777 37,613
Su-var-205 adult head_Top3bdRGG_complementation GEO Drosophila melanogaster GSE119777 15,375
Su-var-205 adult whole-fly ENCODE Drosophila melanogaster ENCSR420PGU 30,576
Su-var-205 third-instar male GEO Drosophila melanogaster GSE56347 1,838
Su-var-205 third-instar male_piwi-mut GEO Drosophila melanogaster GSE56347 5,771
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks