TOP1

Information TOP1

Description

Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then rotates around the intact phosphodiester bond on the opposing strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 5'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells. Involved in the circadian transcription of the core circadian clock component ARNTL/BMAL1 by altering the chromatin structure around the ROR response elements (ROREs) on the ARNTL/BMAL1 promoter. {ECO:0000250|UniProtKB:P11387}.(Source UnitProtKB).

Full Name

topoisomerase (DNA) I

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
8,387
Non-redundant peaks
8,334

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
21969
Official Gene Name
Top1
JASPAR
MGI
MGI:98788
Ensembl
ENSMUSG00000070544
UniProt
Q04750
Genevisible
Q04750
RefSeq
NM_009408
Aliases
AI467334; D130064I21Rik; Top-1
All peaks TOP1
Download BED file
Non redundant peaks TOP1
Download BED file
SEQUENCES TOP1
Download FASTA file
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Datasets Table for TOP1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
TOP1 thymus AIRE-KO GEO Mus musculus GSE92597 8,252
TOP1 thymus GEO Mus musculus GSE92597 135
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks