U2AF1
Information U2AF1
- Description
This gene belongs to the splicing factor SR family of genes. U2 auxiliary factor, comprising a large and a small subunit, is a non-snRNP protein required for the binding of U2 snRNP to the pre-mRNA branch site. This gene encodes the small subunit which plays a critical role in both constitutive and enhancer-dependent RNA splicing by directly mediating interactions between the large subunit and proteins bound to the enhancers. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]
- Full Name
U2 small nuclear RNA auxiliary factor 1
Source NCBI
- Species
Homo sapiens [tax_id: 9606]
- Genome
hg38
ReMap Statistics
- Datasets
- 4
- Biotypes
- 2
- Peaks
- 85,444
- Non-redundant peaks
- 54,625
TF Classification
- Super Class
- NA
- Class
- NA
- Familly
- NA
- Sub Familly
- NA
Source TFClass
External IDs
- NCBI Gene
- 7307
- Official Gene Name
- U2AF1
- JASPAR
- Ensembl
- ENSG00000160201
- UniProt
- Q01081
- Genevisible
- Q01081
- RefSeq
- NM_001025203
- Aliases
- FP793; RN; RNU2AF1; U2AF35; U2AFBP
Datasets Table for U2AF1
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| U2AF1 | Hep-G2 | GEO | Homo sapiens | GSE120104 | 45,863 | |||
| U2AF1 | K-562 | GEO | Homo sapiens | GSE120104 | 8,014 | |||
| U2AF1 | K-562 | ENCODE | Homo sapiens | ENCSR690GUG | 4,324 | |||
| U2AF1 | Hep-G2 | ENCODE | Homo sapiens | ENCSR868JLS | 27,243 | |||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |