Ubx

Information Ubx

Description

The gene Ultrabithorax is referred to in FlyBase by the symbol DmelUbx (CG10388, FBgn0003944). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (all unique). Gene sequence location is 3R:16656623..16734426. Its molecular function is described by 6 unique terms, many of which group under: binding; DNA binding; nucleic acid binding; protein binding; organic cyclic compound binding. It is involved in the biological process described with 22 unique terms, many of which group under: muscle structure development; cellular developmental process; regulation of cell fate specification; cell fate determination; segmentation. 469 alleles are reported. The phenotypes of these alleles manifest in: somatic stem cell; larval caeca region; Malpighian tubule; mesothoracic segmental nerve; myoblast. The phenotypic classes of alleles include: phenotype; fertile; increased mortality; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed at stages throughout embryogenesis, during early pupal stages.

Full Name

Ultrabithorax

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
10
Biotypes
2
Peaks
93,642
Non-redundant peaks
28,256

TF Classification

Familly
Homeo domain factors
Sub Familly
HOX-related factors

Source JASPAR

External IDs

NCBI Gene
42034
Official Gene Name
Ubx
JASPAR
MA0094.2
Ensembl
FBgn0003944
UniProt
P83949
Genevisible
P83949
RefSeq
NM_206497
Aliases
Ubx
All peaks Ubx
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Non redundant peaks Ubx
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SEQUENCES Ubx
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Datasets Table for Ubx

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Ubx embryo 0h-16h GEO Drosophila melanogaster GSE64284 14,132
Ubx Kc167 GEO Drosophila melanogaster GSE122574 7,332
Ubx Kc167 Hth GEO Drosophila melanogaster GSE122574 9,637
Ubx Kc167 Homothorax GEO Drosophila melanogaster GSE122573 6,760
Ubx Kc167 Gcm GEO Drosophila melanogaster GSE122573 11,394
Ubx Kc167 mut GEO Drosophila melanogaster GSE69796 5,534
Ubx Kc167 GEO Drosophila melanogaster GSE69796 9,662
Ubx Kc167 Hth GEO Drosophila melanogaster GSE69796 11,094
Ubx Kc167 stable GEO Drosophila melanogaster GSE122573 6,776
Ubx Kc167 Homothorax_Gcm GEO Drosophila melanogaster GSE122573 11,321
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks