Vsx2
Information Vsx2
- Description
The gene Visual system homeobox 2 is referred to in FlyBase by the symbol DmelVsx2 (CG33980, FBgn0263512). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is X:5528927..5560183. Its molecular function is described by: DNA-binding transcription factor activity; sequence-specific double-stranded DNA binding. It is involved in the biological process described with: optic lobe placode development; negative regulation of transcription by RNA polymerase II; regulation of transcription by RNA polymerase II. 10 alleles are reported. The phenotypes of these alleles manifest in: mesothoracic tergum; embryonic/larval somatic muscle; sarcomere; Z disc. The phenotypic classes of alleles include: visible; fertile; lethal - all die during larval stage; viable; lethal.
- Full Name
Visual system homeobox 2
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 1
- Biotypes
- 1
- Peaks
- 22,759
- Non-redundant peaks
- 22,759
TF Classification
- Familly
- Homeo domain factors
- Sub Familly
- Paired-related HD factors
Source JASPAR
External IDs
- NCBI Gene
- 31469
- Official Gene Name
- Vsx2
- JASPAR
- MA0180.1
- Ensembl
- FBgn0263512
- UniProt
- Genevisible
- RefSeq
- NM_001297968
- Aliases
- CG15781; CG15782; CG15783; CG33980; Chx2; DChx2; DmelCG33980; Vsx2; dChx2; dVsx2
Datasets Table for Vsx2
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| Vsx2 | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR816TQX | 22,759 | ||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |