bsh

Information bsh

Description

The gene brain-specific homeobox is referred to in FlyBase by the symbol Dmelsh (CG10604, FBgn0000529). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2L:19765776..19769067. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; DNA-binding transcription factor activity. It is involved in the biological process described with: regulation of transcription, DNA-templated; regulation of transcription by RNA polymerase II; neuron fate commitment; brain development. 17 alleles are reported. The phenotypes of these alleles manifest in: medullary intrinsic neuron Mi1; lamina monopolar neuron L3; lamina monopolar neuron L4; transmedullary neuron; wing. The phenotypic classes of alleles include: viable; partially lethal; visible; neuroanatomy defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of low expression to a trough of no expression detected. Peak expression observed during early pupal stages.

Full Name

brain-specific homeobox

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
46,557
Non-redundant peaks
35,125

TF Classification

Familly
Homeo domain factors
Sub Familly
NK-related factors

Source JASPAR

External IDs

NCBI Gene
35266
Official Gene Name
bsh
JASPAR
MA0214.1
Ensembl
FBgn0000529
UniProt
Q04787
Genevisible
Q04787
RefSeq
NM_206006
Aliases
bsh
All peaks bsh
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Non redundant peaks bsh
Download BED file
SEQUENCES bsh
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Datasets Table for bsh

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
bsh adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR450HPD 22,497
bsh adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR310ZJI 24,060
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks