caup

Information caup

Description

The gene caupolican is referred to in FlyBase by the symbol Dmelcaup (CG10605, FBgn0015919). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3L:12609631..12621798. Its molecular function is described by: DNA-binding transcription factor activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with 10 unique terms, many of which group under: imaginal disc morphogenesis; muscle cell differentiation; neurogenesis; cell development; imaginal disc-derived appendage morphogenesis. 27 alleles are reported. The phenotypes of these alleles manifest in: retina; nervous system; suture; adult neuron; acellular anatomical structure. The phenotypic classes of alleles include: increased cell death; increased mortality; phenotype; sterile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 06-18 hour embryonic stages.

Full Name

caupolican

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
31,747
Non-redundant peaks
31,747

TF Classification

Familly
Homeo domain factors
Sub Familly
TALE-type homeo domain factors

Source JASPAR

External IDs

NCBI Gene
39440
Official Gene Name
caup
JASPAR
MA0217.1
Ensembl
FBgn0015919
UniProt
P54269
Genevisible
P54269
RefSeq
NM_079322
Aliases
caup
All peaks caup
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Non redundant peaks caup
Download BED file
SEQUENCES caup
Download FASTA file
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Datasets Table for caup

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
caup adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR239MPW 31,747
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks