chn

Information chn

Description

The gene charlatan is referred to in FlyBase by the symbol Dmelchn (CG11798, FBgn0015371). It is a protein_coding_gene from Dmel. It has 9 annotated transcripts and 9 polypeptides (7 unique). Gene sequence location is 2R:15115236..15144783. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding; protein binding; sequence-specific DNA binding; DNA-binding transcription repressor activity, RNA polymerase II-specific. It is involved in the biological process described with 11 unique terms, many of which group under: multicellular organismal process; larval somatic muscle development; negative regulation of cell differentiation; plasma membrane bounded cell projection organization; peripheral nervous system development. 44 alleles are reported. The phenotypes of these alleles manifest in: presumptive embryonic/larval system; epidermis; posterior postalar bristle; metathoracic bristle; circulatory system. The phenotypic classes of alleles include: increased mortality; phenotype; some die during embryonic stage; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages.

Full Name

charlatan

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
18,869
Non-redundant peaks
18,869

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
36678
Official Gene Name
chn
JASPAR
Ensembl
FBgn0015371
UniProt
Q7YU81
Genevisible
Q7YU81
RefSeq
NM_206119
Aliases
chn
All peaks chn
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Non redundant peaks chn
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SEQUENCES chn
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Datasets Table for chn

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
chn adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR248JJL 18,869
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks