lmd

Information lmd

Description

The gene lame duck is referred to in FlyBase by the symbol Dmellmd (CG4677, FBgn0039039). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is 3R:23021222..23026713. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with 8 unique terms, many of which group under: developmental process; muscle structure development; multicellular organismal process; anatomical structure development; multicellular organism development. 30 alleles are reported. The phenotypes of these alleles manifest in: non-connected developing system; myoblast; adult tagma; cuboidal/columnar epithelium; dorsal closure embryo. The phenotypic classes of alleles include: lethal; viable; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 06-12 hour embryonic stages.

Full Name

lame duck

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
564
Non-redundant peaks
564

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
42717
Official Gene Name
lmd
JASPAR
Ensembl
FBgn0039039
UniProt
Genevisible
RefSeq
NM_170044
Aliases
lmd
All peaks lmd
Download BED file
Non redundant peaks lmd
Download BED file
SEQUENCES lmd
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for lmd

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
lmd embryo stage-11-12_primary-mesodermal GEO Drosophila melanogaster GSE38402 564
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks