mod-mdg4

Information mod-mdg4

Description

The gene modifier of mdg4 is referred to in FlyBase by the symbol Dmelmod(mdg4) (CG32491, FBgn0002781). It is a protein_coding_gene from Dmel. It has 31 annotated transcripts and 31 polypeptides (all unique). Gene sequence location is 3R:21350846..21377401. Its molecular function is described by: protein homodimerization activity; POZ domain binding; chromatin binding; protein binding; DNA binding. It is involved in the biological process described with 8 unique terms, many of which group under: cellular component organization; chromosome organization; programmed cell death; regulation of macromolecule biosynthetic process; germ cell development. 93 alleles are reported. The phenotypes of these alleles manifest in: organelle; cellular anatomical entity; intracellular anatomical structure; nervous system; sex chromosome. The phenotypic classes of alleles include: cell cycle defective; phenotype; partially lethal; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.

Full Name

modifier of mdg4

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
10
Biotypes
4
Peaks
86,211
Non-redundant peaks
45,725

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
49228
Official Gene Name
mod(mdg4)
JASPAR
Ensembl
FBgn0002781
UniProt
Q86B87
Genevisible
Q86B87
RefSeq
NM_176527
Aliases
mod(mdg4)
All peaks mod-mdg4
Download BED file
Non redundant peaks mod-mdg4
Download BED file
SEQUENCES mod-mdg4
Download FASTA file
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Datasets Table for mod-mdg4

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
mod-mdg4 adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR861XSB 24,638
mod-mdg4 Kc167 HS GEO Drosophila melanogaster GSE62904 13,501
mod-mdg4 Kc167 GEO Drosophila melanogaster GSE103601 1,859
mod-mdg4 Kc167 guinea-pig GEO Drosophila melanogaster GSE51462 2,422
mod-mdg4 Kc167 rabbit GEO Drosophila melanogaster GSE51462 3,303
mod-mdg4 Kc167 GEO Drosophila melanogaster GSE36393 7,777
mod-mdg4 S2-DRSC 3AB GEO Drosophila melanogaster GSE41354 9,931
mod-mdg4 S2-DRSC GEO Drosophila melanogaster GSE41354 7,222
mod-mdg4 ML-DmBG3-c2 alternate-ab GEO Drosophila melanogaster GSE40797 13,612
mod-mdg4 ML-DmBG3-c2 GEO Drosophila melanogaster GSE40797 1,946
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks