opa
Information opa
- Description
The gene odd paired is referred to in FlyBase by the symbol Dmelopa (CG1133, FBgn0003002). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is 3R:4852813..4869979. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription factor activity; RNA polymerase II transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with 6 unique terms, many of which group under: developmental process; anatomical structure development; cell motility; central nervous system development; digestive tract development. 46 alleles are reported. The phenotypes of these alleles manifest in: mesodermal derivative; cuticle; embryonic gnathal segment; trunk mesoderm derivative; segment of antenna. The phenotypic classes of alleles include: pair rule phenotype; some die during embryonic stage; lethal; visible; lethal - all die before end of embryonic stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 00-06 hour embryonic stages.
- Full Name
odd paired
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 3
- Biotypes
- 1
- Peaks
- 35,619
- Non-redundant peaks
- 21,845
TF Classification
- Familly
- C2H2 zinc finger factors
- Sub Familly
- More than 3 adjacent zinc finger factors
Source JASPAR
Datasets Table for opa
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
opa | embryo | blastoderm | GEO | Drosophila melanogaster | GSE141538 | 10,398 | ||
opa | embryo | early_homemade | GEO | Drosophila melanogaster | GSE140722 | 14,171 | ||
opa | embryo | late_homemade | GEO | Drosophila melanogaster | GSE140722 | 11,050 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |