pita

Information pita

Description

The gene pita is referred to in FlyBase by the symbol Dmelpita (CG3941, FBgn0034878). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is 2R:23548967..23554712. Its molecular function is described by 8 unique terms, many of which group under: binding; heterocyclic compound binding; organic cyclic compound binding; nucleic acid binding; DNA binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II; DNA replication; regulation of gene silencing; regulation of transcription, DNA-templated; DNA endoreduplication. 36 alleles are reported. The phenotypes of these alleles manifest in: cell cycle phase; biological phase; nurse cell; metaphase; digestive system. The phenotypic classes of alleles include: lethal; phenotype; increased mortality; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.

Full Name

pita

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
4
Biotypes
4
Peaks
25,281
Non-redundant peaks
17,432

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
37730
Official Gene Name
pita
JASPAR
Ensembl
FBgn0034878
UniProt
Genevisible
RefSeq
NM_166607
Aliases
pita
All peaks pita
Download BED file
Non redundant peaks pita
Download BED file
SEQUENCES pita
Download FASTA file
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Datasets Table for pita

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
pita Schneider-2 GEO Drosophila melanogaster GSE54337 5,194
pita adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR332BCD 11,106
pita embryo GEO Drosophila melanogaster GSE76997 1,794
pita Kc167 GEO Drosophila melanogaster GSE80700 7,187
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks