rib

Information rib

Description

The gene ribbon is referred to in FlyBase by the symbol Dmel ib (CG7230, FBgn0003254). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 2R:19270078..19281396. Its molecular function is described by: DNA-binding transcription factor activity; DNA binding. It is involved in the biological process described with 20 unique terms, many of which group under: cellular component organization or biogenesis; cell migration; cellular component organization; tissue migration; macromolecule localization. 17 alleles are reported. The phenotypes of these alleles manifest in: dorsal closure embryo; larval abdominal segment 2; cell; gonadal sheath proper primordium; reproductive system. The phenotypic classes of alleles include: lethal; phenotype; increased mortality during development; increased mortality. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression. Peak expression observed within 00-18 hour embryonic stages.

Full Name

ribbon

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
8,608
Non-redundant peaks
6,802

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
44855
Official Gene Name
rib
JASPAR
Ensembl
FBgn0003254
UniProt
Genevisible
RefSeq
NM_080534
Aliases
rib
All peaks rib
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Non redundant peaks rib
Download BED file
SEQUENCES rib
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Datasets Table for rib

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
rib embryo stage-11-16_fkh GEO Drosophila melanogaster GSE73780 5,543
rib embryo stage-11-16 GEO Drosophila melanogaster GSE73780 3,065
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks