salm

Information salm

Description

The gene spalt major is referred to in FlyBase by the symbol Dmelsalm (CG6464, FBgn0261648). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is 2L:11434311..11445614. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with 22 unique terms, many of which group under: negative regulation of multicellular organismal process; oenocyte development; development of primary male sexual characteristics; system process; negative regulation of terminal cell fate specification, open tracheal system. 45 alleles are reported. The phenotypes of these alleles manifest in: larval mesothoracic segment; embryonic abdominal segment; peripheral nervous system; pleurum; secondary branch/tracheole primordium. The phenotypic classes of alleles include: phenotype; increased mortality; lethal - all die before end of P-stage; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 06-18 hour embryonic stages.

Full Name

spalt major

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
21,232
Non-redundant peaks
21,232

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
34569
Official Gene Name
salm
JASPAR
Ensembl
FBgn0261648
UniProt
P39770
Genevisible
P39770
RefSeq
NM_164966
Aliases
salm
All peaks salm
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Non redundant peaks salm
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SEQUENCES salm
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Datasets Table for salm

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
salm adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR276LGX 21,232
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks