so

Information so

Description

The gene sine oculis is referred to in FlyBase by the symbol Dmelso (CG11121, FBgn0003460). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 2R:7419350..7434872. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; transcription factor binding; sequence-specific DNA binding; protein binding. It is involved in the biological process described with 11 unique terms, many of which group under: multicellular organism development; circadian rhythm; rhythmic process; ectodermal placode morphogenesis; response to external stimulus. 73 alleles are reported. The phenotypes of these alleles manifest in: eye disc; cuticle; embryonic/larval neuron; cell body rind of the central nervous system; tract. The phenotypic classes of alleles include: phenotype; viable; increased mortality; increased occurrence of cell division. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the pupal period.

Full Name

sine oculis

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
14,814
Non-redundant peaks
14,705

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
35662
Official Gene Name
so
JASPAR
Ensembl
FBgn0003460
UniProt
Q27350
Genevisible
Q27350
RefSeq
NM_057385
Aliases
so
All peaks so
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Non redundant peaks so
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SEQUENCES so
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Datasets Table for so

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
so third-instar eye-antennal-imaginal_disc_Ctrl GEO Drosophila melanogaster GSE52943 655
so third-instar eye-antennal-imaginal_disc GEO Drosophila melanogaster GSE52943 14,159
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks