sv

Information sv

Description

The gene shaven is referred to in FlyBase by the symbol Dmelsv (CG11049, FBgn0005561). It is a protein_coding_gene from Dmel. It has 7 annotated transcripts and 7 polypeptides (all unique). Gene sequence location is 4:1088798..1113317. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding; cis-regulatory region sequence-specific DNA binding. It is involved in the biological process described with 6 unique terms, many of which group under: regulation of photoreceptor cell differentiation; regulation of cell fate specification; neuron differentiation; cellular developmental process; eye development. 62 alleles are reported. The phenotypes of these alleles manifest in: rhabdomere; nephrocyte; antennal segment; plasma membrane bounded cell projection; developing material anatomical entity. The phenotypic classes of alleles include: increased mortality; lethal - all die before end of first instar larval stage; viable; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 06-18 hour embryonic stages.

Full Name

shaven

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
13,869
Non-redundant peaks
13,869

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
43825
Official Gene Name
sv
JASPAR
Ensembl
FBgn0005561
UniProt
Genevisible
RefSeq
NM_166822
Aliases
sv
All peaks sv
Download BED file
Non redundant peaks sv
Download BED file
SEQUENCES sv
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for sv

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
sv adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR570ADO 13,869
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks