tin

Information tin

Description

The gene tinman is referred to in FlyBase by the symbol Dmel in (CG7895, FBgn0004110). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3R:21378977..21381970. Its molecular function is described by: DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding. It is involved in the biological process described with 21 unique terms, many of which group under: metamorphosis; salivary gland morphogenesis; negative regulation of RNA biosynthetic process; positive regulation of RNA metabolic process; morphogenesis of embryonic epithelium. 62 alleles are reported. The phenotypes of these alleles manifest in: excretory system; pericardial cell; circulatory system; germline cell; embryonic/larval midgut muscle. The phenotypic classes of alleles include: phenotype; flight defective; lethal - all die before end of embryonic stage; increased mortality. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 00-06 hour embryonic stages.

Full Name

tinman

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
27,123
Non-redundant peaks
27,123

TF Classification

Familly
Homeo domain factors
Sub Familly
Homeo

Source JASPAR

External IDs

NCBI Gene
42536
Official Gene Name
tin
JASPAR
MA0247.1
Ensembl
FBgn0004110
UniProt
P22711
Genevisible
P22711
RefSeq
NM_079709
Aliases
tin
All peaks tin
Download BED file
Non redundant peaks tin
Download BED file
SEQUENCES tin
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for tin

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
tin adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR064GFC 27,123
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks