topi

Information topi

Description

The gene matotopetli is referred to in FlyBase by the symbol Dmel opi (CG8484, FBgn0037751). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3R:9775121..9777943. Its molecular function is described by: protein binding; DNA-binding transcription factor activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding. It is involved in the biological process described with: spermatogenesis; regulation of transcription by RNA polymerase II; male meiotic nuclear division; positive regulation of transcription involved in meiotic cell cycle. 12 alleles are reported. The phenotypes of these alleles manifest in: nucleolus; secondary spermatocyte; spermatocyte; spermatid; nuclear lamina. The phenotypic classes of alleles include: viable; female fertile; meiotic cell cycle defective; male sterile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed at stages throughout the pupal period, in adult male stages.

Full Name

matotopetli

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
21,526
Non-redundant peaks
21,526

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
41199
Official Gene Name
topi
JASPAR
Ensembl
FBgn0037751
UniProt
Q9VH70
Genevisible
Q9VH70
RefSeq
NM_141688
Aliases
topi
All peaks topi
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Non redundant peaks topi
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SEQUENCES topi
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Datasets Table for topi

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
topi adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR165OGT 21,526
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks