trx

Information trx

Description

The gene trithorax is referred to in FlyBase by the symbol Dmel rx (CG8651, FBgn0003862). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (2 unique). Gene sequence location is 3R:14263358..14286903. Its molecular function is described by 8 unique terms, many of which group under: binding; protein binding; organic cyclic compound binding; DNA-binding transcription factor activity; protein dimerization activity. It is involved in the biological process described with 11 unique terms, many of which group under: system development; developmental process; multicellular organism development; macromolecule methylation; anatomical structure development. 140 alleles are reported. The phenotypes of these alleles manifest in: type I neuroblast; abdominal tergite 6; epithelium; adult external mesothorax; ganglion. The phenotypic classes of alleles include: increased mortality during development; viable; lethal; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.

Full Name

trithorax

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
25,436
Non-redundant peaks
15,633

TF Classification

Familly
Nuclear receptors with C4 zinc fingers
Sub Familly

Source JASPAR

External IDs

NCBI Gene
41737
Official Gene Name
trx
JASPAR
UN0109.1
Ensembl
FBgn0003862
UniProt
P20659
Genevisible
P20659
RefSeq
NM_134282
Aliases
trx
All peaks trx
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Non redundant peaks trx
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SEQUENCES trx
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Datasets Table for trx

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
trx Schneider-2 NT_homemade GEO Drosophila melanogaster GSE81795 9,722
trx Schneider-2 CT_homemade GEO Drosophila melanogaster GSE81795 5,017
trx S2-DRSC GEO Drosophila melanogaster GSE24521 10,697
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks