AFF4
Information AFF4
- Description
Key component of the super elongation complex (SEC), a complex required to increase the catalytic rate of RNA polymerase II transcription by suppressing transient pausing by the polymerase at multiple sites along the DNA. In the SEC complex, AFF4 acts as a central scaffold that recruits other factors through direct interactions with ELL proteins (ELL, ELL2 or ELL3) and the P-TEFb complex. In case of infection by HIV-1 virus, the SEC complex is recruited by the viral Tat protein to stimulate viral gene expression (By similarity). {ECO:0000250}.(Source UnitProtKB).
- Full Name
AF4/FMR2 family, member 4
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 4
- Biotypes
- 2
- Peaks
- 36,492
- Non-redundant peaks
- 22,742
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 93736
- Official Gene Name
- Aff4
- JASPAR
- MGI
- MGI:2136171
- Ensembl
- ENSMUSG00000049470
- UniProt
- Q9ESC8
- Genevisible
- Q9ESC8
- RefSeq
- NM_033565
- Aliases
- Alf4; Laf4l
Datasets Table for AFF4
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
AFF4 | Th1 | GEO | Mus musculus | GSE62482 | 11,868 | |||
AFF4 | Th1 | TBX21-KO | GEO | Mus musculus | GSE62482 | 5,677 | ||
AFF4 | EL4 | GFP_RA | GEO | Mus musculus | GSE62482 | 10,582 | ||
AFF4 | EL4 | RA | GEO | Mus musculus | GSE62482 | 8,365 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |