AGO1

Information AGO1

Description

Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.

Full Name

Stabilizer of iron transporter SufD / Polynucleotidyl transferase

Source NCBI

Species

Arabidopsis thaliana [tax_id: 3702]

Genome

TAIR10

ReMap Statistics

Datasets
12
Biotypes
1
Peaks
240,430
Non-redundant peaks
48,541

TF Classification

Familly
NA
Sub Familly
NA

Source AtTFDB

External IDs

NCBI Gene
841262
Official Gene Name
AGO1
JASPAR
Ensembl
AT1G48410
UniProt
O04379
Genevisible
O04379
RefSeq
NM_179453.3
Aliases
All peaks AGO1
Download BED file
Non redundant peaks AGO1
Download BED file
SEQUENCES AGO1
Download FASTA file
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Datasets Table for AGO1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
AGO1 Col-0 Col-0_seedling 10d-wt GEO Arabidopsis thaliana GSE95301 22,592
AGO1 Col-0 Col-0_seedling 10d-wt_Cold GEO Arabidopsis thaliana GSE95301 20,399
AGO1 Col-0 Col-0_seedling 10d-mutant GEO Arabidopsis thaliana GSE95301 25,326
AGO1 Col-0 Col-0_seedling 10d-wt_MeJAcontrol GEO Arabidopsis thaliana GSE95301 12,005
AGO1 Col-0 Col-0_seedling 10d-wt-BTH GEO Arabidopsis thaliana GSE95301 22,397
AGO1 Col-0 Col-0_seedling 10d-wt_MeJA GEO Arabidopsis thaliana GSE95301 10,826
AGO1 Col-0 Col-0_seedling 10d-wt_Coldcontrol GEO Arabidopsis thaliana GSE95301 17,590
AGO1 Col-0 Col-0_seedling 10d-wt_Flg22control GEO Arabidopsis thaliana GSE95301 22,249
AGO1 Col-0 Col-0_seedling 10d-wt_Flg22 GEO Arabidopsis thaliana GSE95301 18,331
AGO1 Col-0 Col-0_seedling 10d-wt_IAAcontrol GEO Arabidopsis thaliana GSE95301 23,750
AGO1 Col-0 Col-0_seedling 10d-wt_IAA GEO Arabidopsis thaliana GSE95301 21,930
AGO1 Col-0 Col-0_seedling 10d-wt_BTHcontrol GEO Arabidopsis thaliana GSE95301 23,035
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks