AGO2

Information AGO2

Description

The gene Argonaute 2 is referred to in FlyBase by the symbol DmelAGO2 (CG7439, FBgn0087035). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (all unique). Gene sequence location is 3L:15554113..15561042. Its molecular function is described by: endoribonuclease activity, cleaving siRNA-paired mRNA; siRNA binding; endoribonuclease activity; protein binding; single-stranded RNA binding. It is involved in the biological process described with 17 unique terms, many of which group under: multicellular organism development; cellular response to virus; regulation of cellular process; dosage compensation; regulation of viral life cycle. 31 alleles are reported. The phenotypes of these alleles manifest in: nucleus; primordial germ cell; pole bud; condensed chromosome. The phenotypic classes of alleles include: increased mortality; increased mortality during development; phenotype; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period, in adult female stages.

Full Name

Argonaute 2

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
9
Biotypes
4
Peaks
81,994
Non-redundant peaks
46,761

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
39683
Official Gene Name
AGO2
JASPAR
Ensembl
FBgn0087035
UniProt
Q9VUQ5
Genevisible
Q9VUQ5
RefSeq
NM_168626
Aliases
AGO2
All peaks AGO2
Download BED file
Non redundant peaks AGO2
Download BED file
SEQUENCES AGO2
Download FASTA file
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Datasets Table for AGO2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
AGO2 Schneider-2 Mueller GEO Drosophila melanogaster GSE22623 8,430
AGO2 Schneider-2 GEO Drosophila melanogaster GSE22623 3,856
AGO2 Schneider-2 GEO Drosophila melanogaster GSE51134 1,362
AGO2 adult head_FLAG GEO Drosophila melanogaster GSE119777 21,032
AGO2 Kc167 triptolide GEO Drosophila melanogaster GSE116887 12,990
AGO2 Kc167 GEO Drosophila melanogaster GSE116887 6,803
AGO2 Kc167 dslaminb GEO Drosophila melanogaster GSE101365 2,124
AGO2 Kc167 GEO Drosophila melanogaster GSE101365 19,388
AGO2 Schneider-3 GEO Drosophila melanogaster GSE22623 6,009
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks