ARID2
Information ARID2
- Description
This gene encodes a member of the AT-rich interactive domain (ARID)-containing family of DNA-binding proteins. Members of the ARID family have roles in embryonic patterning, cell lineage gene regulation, cell cycle control, transcriptional regulation and chromatin structure modification. This protein functions as a subunit of the polybromo- and BRG1-associated factor or PBAF (SWI/SNF-B) chromatin remodeling complex which facilitates ligand-dependent transcriptional activation by nuclear receptors. Mutations in this gene are associated with hepatocellular carcinomas. A pseudogene of this gene is found on chromosome1. [provided by RefSeq, Dec 2016]
- Full Name
AT-rich interaction domain 2
Source NCBI
- Species
Homo sapiens [tax_id: 9606]
- Genome
hg38
ReMap Statistics
- Datasets
- 12
- Biotypes
- 6
- Peaks
- 268,102
- Non-redundant peaks
- 147,031
TF Classification
- Super Class
- NA
- Class
- NA
- Familly
- NA
- Sub Familly
- NA
Source TFClass
External IDs
- NCBI Gene
- 196528
- Official Gene Name
- ARID2
- JASPAR
- Ensembl
- ENSG00000189079
- UniProt
- Q68CP9
- Genevisible
- Q68CP9
- RefSeq
- NM_001347839
- Aliases
- BAF200; DKFZp686G052; FLJ30619; KIAA1557
Datasets Table for ARID2
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| ARID2 | MCF-7 | parental | GEO | Homo sapiens | GSE123284 | 15,912 | ||
| ARID2 | MCF-7 | parental_4-hydroxytamoxifen | GEO | Homo sapiens | GSE123284 | 17,552 | ||
| ARID2 | Aska-SS | shSSX | GEO | Homo sapiens | GSE108025 | 41,234 | ||
| ARID2 | Aska-SS | GEO | Homo sapiens | GSE108025 | 32,305 | |||
| ARID2 | BIN-67 | lentivirus-SMARCA4 | GEO | Homo sapiens | GSE117734 | 32,859 | ||
| ARID2 | BIN-67 | ctrl | GEO | Homo sapiens | GSE117734 | 14,281 | ||
| ARID2 | BIN-67 | lentivirus-SMARCA4-T910M | GEO | Homo sapiens | GSE117734 | 21,610 | ||
| ARID2 | BIN-67 | lentivirus-SMARCA4-K785R | GEO | Homo sapiens | GSE117734 | 32,032 | ||
| ARID2 | NGP | GEO | Homo sapiens | GSE134626 | 8,393 | |||
| ARID2 | NGP | ARID1A-mut2 | GEO | Homo sapiens | GSE134626 | 21,640 | ||
| ARID2 | Hep-G2 | GEO | Homo sapiens | GSE69566 | 20,399 | |||
| ARID2 | K-562 | ENCODE | Homo sapiens | ENCSR491EBY | 9,885 | |||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |