BCL6

Information BCL6

Description

Transcriptional repressor mainly required for germinal center (GC) formation and antibody affinity maturation which has different mechanisms of action specific to the lineage and biological functions. Forms complexes with different corepressors and histone deacetylases to repress the transcriptional expression of different subsets of target genes. Represses its target genes by binding directly to the DNA sequence 5'-TTCCTAGAA-3' (BCL6-binding site) or indirectly by repressing the transcriptional activity of transcription factors. In GC B-cells, represses genes that function in differentiation, inflammation, apoptosis and cell cycle control, also autoregulates its transcriptional expression and up-regulates, indirectly, the expression of some genes important for GC reactions, such as AICDA, through the repression of microRNAs expression, like miR155. An important function is to allow GC B-cells to proliferate very rapidly in response to T-cell dependent antigens and tolerate the physiological DNA breaks required for immunglobulin class switch recombination and somatic hypermutation without inducing a p53/TP53-dependent apoptotic response. In follicular helper CD4(+) T-cells (T(FH) cells), promotes the expression of T(FH)-related genes but inhibits the differentiation of T(H)1, T(H)2 and T(H)17 cells. Also required for the establishment and maintenance of immunological memory for both T- and B-cells. Suppresses macrophage proliferation through competition with STAT5 for STAT-binding motifs binding on certain target genes, such as CCL2 and CCND2. In response to genotoxic stress, controls cell cycle arrest in GC B-cells in both p53/TP53-dependedent and -independent manners. Besides, also controls neurogenesis through the alteration of the composition of NOTCH-dependent transcriptional complexes at selective NOTCH targets, such as HES5, including the recruitment of the deacetylase SIRT1 and resulting in an epigenetic silencing leading to neuronal differentiation. {ECO:0000269|PubMed:10981963, ECO:0000269|PubMed:12021781, ECO:0000269|PubMed:23160044, ECO:0000269|PubMed:23166356, ECO:0000269|PubMed:23455674}.(Source UnitProtKB).

Full Name

B cell leukemia/lymphoma 6

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
16
Biotypes
6
Peaks
158,275
Non-redundant peaks
62,926

TF Classification

Familly
C2H2 zinc finger factors
Sub Familly
More than 3 adjacent zinc finger factors

Source JASPAR

External IDs

NCBI Gene
12053
Official Gene Name
Bcl6
JASPAR
MA0463.1
MGI
MGI:107187
Ensembl
ENSMUSG00000022508
UniProt
P41183
Genevisible
P41183
RefSeq
NM_009744
Aliases
Bcl5
All peaks BCL6
Download BED file
Non redundant peaks BCL6
Download BED file
SEQUENCES BCL6
Download FASTA file
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Datasets Table for BCL6

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
BCL6 spleen 72h GEO Mus musculus GSE41317 322
BCL6 T-cell Tfh GEO Mus musculus GSE72188 727
BCL6 T-cell GEO Mus musculus GSE72188 422
BCL6 liver Ppard-KO GEO Mus musculus GSE118788 36,684
BCL6 liver GEO Mus musculus GSE118788 19,520
BCL6 liver LKO GEO Mus musculus GSE118788 405
BCL6 liver Ppar-KO GEO Mus musculus GSE118788 14,344
BCL6 liver male GEO Mus musculus GSE31578 14,812
BCL6 liver C57 GEO Mus musculus GSE118788 12,093
BCL6 liver female GEO Mus musculus GSE31578 5,110
BCL6 cortical-progenitor GEO Mus musculus GSE132964 614
BCL6 BMDM GEO Mus musculus GSE16723 8,509
BCL6 BMDM LPS GEO Mus musculus GSE16723 1,362
BCL6 adipocyte inguinal GEO Mus musculus GSE113407 164
BCL6 liver ctrl GEO Mus musculus GSE118788 39,581
BCL6 liver Fast GEO Mus musculus GSE118788 3,606
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks