BPC1

Information BPC1

Description

BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant.

Full Name

basic pentacysteine1

Source NCBI

Species

Arabidopsis thaliana [tax_id: 3702]

Genome

TAIR10

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
3,368
Non-redundant peaks
3,339

TF Classification

Familly
BBR/BPC
Sub Familly
NA

Source AtTFDB

External IDs

NCBI Gene
814724
Official Gene Name
BPC1
JASPAR
MA1404
Ensembl
AT2G01930
UniProt
Q9SKD0
Genevisible
Q9SKD0
RefSeq
NM_201669.2
Aliases

External links
All peaks BPC1
Download BED file
Non redundant peaks BPC1
Download BED file
SEQUENCES BPC1
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for BPC1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
BPC1 Col Col_whole-plant 30h GEO Arabidopsis thaliana GSE84483 3,071
BPC1 Col-0 Col-0_leaves tnt_col GEO Arabidopsis thaliana GSE60141 297
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks