CCA1
Information CCA1
- Description
Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.
- Full Name
circadian clock associated 1
Source NCBI
- Species
Arabidopsis thaliana [tax_id: 3702]
- Genome
TAIR10
ReMap Statistics
- Datasets
- 4
- Biotypes
- 2
- Peaks
- 13,639
- Non-redundant peaks
- 9,174
TF Classification
- Familly
- MYB-related
- Sub Familly
- NA
Source AtTFDB
Datasets Table for CCA1
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| CCA1 | Col-0 | Col-0_seedling | 14d | GEO | Arabidopsis thaliana | GSE67903 | 5,046 | |
| CCA1 | Ws-2 | Ws-2_seedling | 14d-LL | GEO | Arabidopsis thaliana | GSE70533 | 2,669 | |
| CCA1 | Ws-2 | Ws-2_seedling | 14d-LD | GEO | Arabidopsis thaliana | GSE70533 | 5,512 | |
| CCA1 | Ws-2 | Ws-2_seedling | 14d-LL-ZT14 | GEO | Arabidopsis thaliana | GSE70533 | 412 | |
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |