CHD1

Information CHD1

Description

ATP-dependent chromatin-remodeling factor which functions as substrate recognition component of the transcription regulatory histone acetylation (HAT) complex SAGA. Regulates polymerase II transcription. Also required for efficient transcription by RNA polymerase I, and more specifically the polymerase I transcription termination step. Regulates negatively DNA replication. Not only involved in transcription-related chromatin-remodeling, but also required to maintain a specific chromatin configuration across the genome. Required for the bridging of SNF2, the FACT complex, the PAF complex as well as the U2 snRNP complex to H3K4me3. Functions to modulate the efficiency of pre-mRNA splicing in part through physical bridging of spliceosomal components to H3K4me3 (By similarity). Required for maintaining open chromatin and pluripotency in embryonic stem cells (PubMed:19587682). Is also associated with histone deacetylase (HDAC) activity (PubMed:12890497). {ECO:0000250|UniProtKB:O14646, ECO:0000269|PubMed:12890497, ECO:0000269|PubMed:19587682}.(Source UnitProtKB).

Full Name

chromodomain helicase DNA binding protein 1

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
5,976
Non-redundant peaks
5,557

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
12648
Official Gene Name
Chd1
JASPAR
MGI
MGI:88393
Ensembl
ENSMUSG00000023852
UniProt
P40201
Genevisible
P40201
RefSeq
NM_007690
Aliases
4930525N21Rik; AI851787; AW555109
All peaks CHD1
Download BED file
Non redundant peaks CHD1
Download BED file
SEQUENCES CHD1
Download FASTA file
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Datasets Table for CHD1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
CHD1 MEL ENCODE Mus musculus ENCSR000ESN 3,402
CHD1 CH12-LX ENCODE Mus musculus ENCSR000EQV 2,574
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks