Cap-H2
Information Cap-H2
- Description
The gene Chromosome associated protein H2 is referred to in FlyBase by the symbol DmelCap-H2 (CG14685, FBgn0037831). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (all unique). Gene sequence location is 3R:10761310..10766756. Its molecular function is described by: chromatin binding; protein binding. It is involved in the biological process described with 6 unique terms, many of which group under: organelle organization; chromosome separation; chromosome segregation; DNA packaging; multicellular organismal reproductive process. 17 alleles are reported. The phenotypes of these alleles manifest in: nuclear envelope; spermatozoon; polytene chromosome; embryonic/larval salivary gland. The phenotypic classes of alleles include: viable; partially lethal; fertile; meiotic cell cycle defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period.
- Full Name
Chromosome associated protein H2
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 7
- Biotypes
- 1
- Peaks
- 31,139
- Non-redundant peaks
- 14,077
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 41289
- Official Gene Name
- Cap-H2
- JASPAR
- Ensembl
- FBgn0037831
- UniProt
- Genevisible
- RefSeq
- NM_206471
- Aliases
- Cap-H2
Datasets Table for Cap-H2
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
Cap-H2 | Kc167 | FLV | GEO | Drosophila melanogaster | GSE118756 | 3,451 | ||
Cap-H2 | Kc167 | asynchronous | GEO | Drosophila melanogaster | GSE54529 | 6,062 | ||
Cap-H2 | Kc167 | HS | GEO | Drosophila melanogaster | GSE62904 | 2,422 | ||
Cap-H2 | Kc167 | GEO | Drosophila melanogaster | GSE118756 | 4,206 | |||
Cap-H2 | Kc167 | CTCF-RNAi | GEO | Drosophila melanogaster | GSE54529 | 3,237 | ||
Cap-H2 | Kc167 | NT | GEO | Drosophila melanogaster | GSE62904 | 5,950 | ||
Cap-H2 | Kc167 | interphase | GEO | Drosophila melanogaster | GSE54529 | 5,811 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |