Cap-H2

Information Cap-H2

Description

The gene Chromosome associated protein H2 is referred to in FlyBase by the symbol DmelCap-H2 (CG14685, FBgn0037831). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (all unique). Gene sequence location is 3R:10761310..10766756. Its molecular function is described by: chromatin binding; protein binding. It is involved in the biological process described with 6 unique terms, many of which group under: organelle organization; chromosome separation; chromosome segregation; DNA packaging; multicellular organismal reproductive process. 17 alleles are reported. The phenotypes of these alleles manifest in: nuclear envelope; spermatozoon; polytene chromosome; embryonic/larval salivary gland. The phenotypic classes of alleles include: viable; partially lethal; fertile; meiotic cell cycle defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period.

Full Name

Chromosome associated protein H2

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
7
Biotypes
1
Peaks
31,139
Non-redundant peaks
14,077

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
41289
Official Gene Name
Cap-H2
JASPAR
Ensembl
FBgn0037831
UniProt
Genevisible
RefSeq
NM_206471
Aliases
Cap-H2
All peaks Cap-H2
Download BED file
Non redundant peaks Cap-H2
Download BED file
SEQUENCES Cap-H2
Download FASTA file
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Datasets Table for Cap-H2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Cap-H2 Kc167 FLV GEO Drosophila melanogaster GSE118756 3,451
Cap-H2 Kc167 asynchronous GEO Drosophila melanogaster GSE54529 6,062
Cap-H2 Kc167 HS GEO Drosophila melanogaster GSE62904 2,422
Cap-H2 Kc167 GEO Drosophila melanogaster GSE118756 4,206
Cap-H2 Kc167 CTCF-RNAi GEO Drosophila melanogaster GSE54529 3,237
Cap-H2 Kc167 NT GEO Drosophila melanogaster GSE62904 5,950
Cap-H2 Kc167 interphase GEO Drosophila melanogaster GSE54529 5,811
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks