Clamp

Information Clamp

Description

The gene Chromatin-linked adaptor for MSL proteins is referred to in FlyBase by the symbol DmelClamp (CG1832, FBgn0032979). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (all unique). Gene sequence location is 2L:22165720..22169143. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II. 17 alleles are reported. The phenotypes of these alleles manifest in: polytene chromosome; wing. The phenotypic classes of alleles include: lethal - all die before end of P-stage; lethal; viable; visible; some die during larval stage; developmental rate defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis.

Full Name

Chromatin-linked adaptor for MSL proteins

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
35
Biotypes
4
Peaks
267,583
Non-redundant peaks
59,167

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
35445
Official Gene Name
Clamp
JASPAR
Ensembl
FBgn0032979
UniProt
Genevisible
RefSeq
NM_136293
Aliases
Clamp

External links
All peaks Clamp
Download BED file
Non redundant peaks Clamp
Download BED file
SEQUENCES Clamp
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for Clamp

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Clamp Schneider-2 GEO Drosophila melanogaster GSE39271 11,992
Clamp Schneider-2 msl-2-RNAi GEO Drosophila melanogaster GSE39271 16,680
Clamp Schneider-2 Trl GEO Drosophila melanogaster GSE107059 7,259
Clamp Schneider-2 GFP GEO Drosophila melanogaster GSE107059 2,657
Clamp Schneider-2 Trl_RNAi1 GEO Drosophila melanogaster GSE119708 10,418
Clamp Schneider-2 gst_RNAi2 GEO Drosophila melanogaster GSE119708 9,998
Clamp Schneider-2 Clamp1_RNAi1 GEO Drosophila melanogaster GSE119708 6,309
Clamp Schneider-2 gst_RNAi1 GEO Drosophila melanogaster GSE119708 10,106
Clamp Schneider-2 Clamp1_RNAi3 GEO Drosophila melanogaster GSE119708 2,981
Clamp Schneider-2 Clamp2_RNAi3 GEO Drosophila melanogaster GSE119708 2,472
Clamp Schneider-2 Trl_RNAi2 GEO Drosophila melanogaster GSE119708 10,574
Clamp Schneider-2 Clamp2_RNAi2 GEO Drosophila melanogaster GSE119708 3,664
Clamp Schneider-2 Trl_RNAi3 GEO Drosophila melanogaster GSE119708 11,068
Clamp Schneider-2 gst_RNAi3 GEO Drosophila melanogaster GSE119708 10,019
Clamp embryo female_nuclear-cycle-13 GEO Drosophila melanogaster GSE119448 15,531
Clamp embryo female_nuclear-cycle-14 GEO Drosophila melanogaster GSE119448 6,953
Clamp embryo female_nuclear-cycle-11 GEO Drosophila melanogaster GSE119448 14,300
Clamp embryo female_nuclear-cycle-inf-10 GEO Drosophila melanogaster GSE119448 1,011
Clamp embryo female_nuclear-cycle-12 GEO Drosophila melanogaster GSE119448 12,215
Clamp embryo PR GEO Drosophila melanogaster GSE150297 7,073
Clamp embryo female_NC12 GEO Drosophila melanogaster GSE133637 7,463
Clamp embryo female_NC11 GEO Drosophila melanogaster GSE133637 6,358
Clamp embryo male_NC14 GEO Drosophila melanogaster GSE133637 10,905
Clamp embryo female_NC13 GEO Drosophila melanogaster GSE133637 6,363
Clamp embryo male_NC13 GEO Drosophila melanogaster GSE133637 7,259
Clamp embryo DWT GEO Drosophila melanogaster GSE150297 18,225
Clamp embryo female_NC14 GEO Drosophila melanogaster GSE133637 2,135
Clamp embryo female GEO Drosophila melanogaster GSE133637 853
Clamp embryo male_NC11 GEO Drosophila melanogaster GSE133637 222
Clamp embryo male_NC12 GEO Drosophila melanogaster GSE133637 3,441
Clamp Kc167 abcam GEO Drosophila melanogaster GSE103601 3,952
Clamp Kc167 GEO Drosophila melanogaster GSE118699 5,620
Clamp Kc167 dsCP190 GEO Drosophila melanogaster GSE118699 2,214
Clamp Kc167 GEO Drosophila melanogaster GSE103601 5,602
Clamp Kc GEO Drosophila melanogaster GSE39271 13,691
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks