DGCR8
Information DGCR8
- Description
Component of the microprocessor complex that acts as a RNA- and heme-binding protein that is involved in the initial step of microRNA (miRNA) biogenesis (PubMed:17259983). Component of the microprocessor complex that is required to process primary miRNA transcripts (pri-miRNAs) to release precursor miRNA (pre-miRNA) in the nucleus. Within the microprocessor complex, DGCR8 function as a molecular anchor necessary for the recognition of pri-miRNA at dsRNA-ssRNA junction and directs DROSHA to cleave 11 bp away form the junction to release hairpin-shaped pre-miRNAs that are subsequently cut by the cytoplasmic DICER to generate mature miRNAs. The heme-bound DGCR8 dimer binds pri-miRNAs as a cooperative trimer (of dimers) and is active in triggering pri-miRNA cleavage, whereas the heme-free DGCR8 monomer binds pri-miRNAs as a dimer and is much less active. Both double-stranded and single-stranded regions of a pri-miRNA are required for its binding. Specifically recognizes and binds N6-methyladenosine (m6A)-containing pri-miRNAs, a modification required for pri-miRNAs processing (By similarity). Involved in the silencing of embryonic stem cell self-renewal (PubMed:17259983). {ECO:0000250|UniProtKB:Q8WYQ5, ECO:0000269|PubMed:17259983}.(Source UnitProtKB).
- Full Name
DGCR8, microprocessor complex subunit
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 4
- Biotypes
- 1
- Peaks
- 14,602
- Non-redundant peaks
- 13,418
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 94223
- Official Gene Name
- Dgcr8
- JASPAR
- MGI
- MGI:2151114
- Ensembl
- ENSMUSG00000022718
- UniProt
- Q9EQM6
- Genevisible
- Q9EQM6
- RefSeq
- NM_033324
- Aliases
- D16H22S1742E; D16H22S788E; D16Wis2; DiGeorge syndrome critical region gene 8; Gy1; N41; Vo59c07
Datasets Table for DGCR8
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
DGCR8 | mESC | 37 | GEO | Mus musculus | GSE92257 | 9,646 | ||
DGCR8 | mESC | DSG | GEO | Mus musculus | GSE92257 | 4,108 | ||
DGCR8 | mESC | HS | GEO | Mus musculus | GSE92257 | 734 | ||
DGCR8 | mESC | WT | GEO | Mus musculus | GSE92257 | 114 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |