DNMT3B

Information DNMT3B

Description

CpG methylation is an epigenetic modification that is important for embryonic development, imprinting, and X-chromosome inactivation. Studies in mice have demonstrated that DNA methylation is required for mammalian development. This gene encodes a DNA methyltransferase which is thought to function in de novo methylation, rather than maintenance methylation. The protein localizes primarily to the nucleus and its expression is developmentally regulated. Mutations in this gene cause the immunodeficiency-centromeric instability-facial anomalies (ICF) syndrome. Eight alternatively spliced transcript variants have been described. The full length sequences of variants 4 and 5 have not been determined. [provided by RefSeq, May 2011]

Full Name

DNA methyltransferase 3 beta

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
4
Biotypes
2
Peaks
146,149
Non-redundant peaks
114,551

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
1789
Official Gene Name
DNMT3B
JASPAR
Ensembl
ENSG00000088305
UniProt
Q9UBC3
Genevisible
Q9UBC3
RefSeq
NM_001207055
Aliases
ICF; ICF1; M.HsaIIIB
All peaks DNMT3B
Download BED file
Non redundant peaks DNMT3B
Download BED file
SEQUENCES DNMT3B
Download FASTA file
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Datasets Table for DNMT3B

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
DNMT3B Hep-G2 ENCODE Homo sapiens ENCSR283OLA 18,910
DNMT3B Hep-G2 ENCODE Homo sapiens ENCSR156CWW 9,509
DNMT3B HUES-8 TripleKO-TET1-2-3 GEO Homo sapiens GSE99346 65,007
DNMT3B HUES-8 GEO Homo sapiens GSE99346 52,723
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks